MirGeneDB 3.0
MirGeneDB ID

Eba-Mir-1990-P1

Family name MIR-1990 (all species)
Species Epimenia (Solenogaster) (Epimenia babai)
MiRBase ID
Paralogues Eba-Mir-1990-P2 
Orthologues Agr-Mir-1990-P1  Cte-Mir-1990-P1  Efe-Mir-1990-o1  Efe-Mir-1990-P1  Lan-Mir-1990-P1  Ofu-Mir-1990-P1  Pdu-Mir-1990-P1  War-Mir-1990-P1 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_011762755.2_ASM1176275v2_Epimenia)		 WURV02000011.1: 17965-18024 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-1990-P1)		 Mir-1990-P1 WURV02000011.1: 17965-18024 [+] Ensembl
Mir-1990-P2 WURV02000011.1: 21216-21272 [+] Ensembl
Mir-1986 WURV02000011.1: 22172-22228 [+] Ensembl
Seed CGGGACU
Precursor
(pre-Mir +30nt flank)		 
ACUCGAUGGUAUAUAAAAGCCUGGCCGGACUGUAAAUUGACAUAGUCCCUGGGUGUGUUCAGAAGACUCGGGACUGCGUCAAUUUAUGGGUUGGUCGACGGCUGACGUCGAAGCAGAAGC
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Structure
        10        20          30        40        50          
ACUCGAUGGUAUAUAAAA   --|     GA            A       U    GUGUU 
                  GCC  UGGCCG  CUGUAAAUUGAC UAGUCCC GGGU     \
                  CGG  GCUGGU  GGUAUUUAACUG GUCAGGG CUCA     C
CGAAGACGAAGCUGCAGU   CA^     UG            C       -    GAAGA 
.       110       100        90        80        70
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
To
Star sequence

Eba-Mir-1990-P1_5p*
mirBase accessionNone
Sequence 
0- UGUAAAUUGACAUAGUCCCUGGGU -24
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Mature sequence

Eba-Mir-1990-P1_3p
mirBase accessionNone
Sequence 
37- UCGGGACUGCGUCAAUUUAUGGG -60
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