MirGeneDB 3.0
MirGeneDB ID

Eba-Mir-1990-P2

Family name MIR-1990 (all species)
Species Epimenia (Solenogaster) (Epimenia babai)
MiRBase ID
Paralogues Eba-Mir-1990-P1 
Orthologues Agr-Mir-1990-P2  Cte-Mir-1990-P2  Cte-Mir-1990-P2-as  Efe-Mir-1990-P2  Hru-Mir-1990-P2  Lan-Mir-1990-P2  Lgi-Mir-1990-P2  Mgi-Mir-1990-P2  Mom-Mir-1990-P2  Npo-Mir-1990-P2  Ofu-Mir-1990-P2  Pdu-Mir-1990-P2  Pdu-Mir-1990-P2-as  Pve-Mir-1990-P2a1  Pve-Mir-1990-P2a2  Pve-Mir-1990-P2b  Pve-Mir-1990-P2c  Pve-Mir-1990-P2d  Pve-Mir-1990-P2e  Rph-Mir-1990-P2  War-Mir-1990-P2 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_011762755.2_ASM1176275v2_Epimenia)		 WURV02000011.1: 21216-21272 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-1990-P2)		 Mir-1990-P1 WURV02000011.1: 17965-18024 [+] Ensembl
Mir-1990-P2 WURV02000011.1: 21216-21272 [+] Ensembl
Mir-1986 WURV02000011.1: 22172-22228 [+] Ensembl
Seed GGGACUA
Precursor
(pre-Mir +30nt flank)		 
CCGAUGACGUAAUCGAUCGCCGAUAUACGCAGUAAGUUGACUGAGUCCCAGGUGGCUAUGAUUCCAGGGACUACGUCAACUUCUCGCGCAUGCUCGGCCGUAAGCAACGCAGACGAA
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Structure
        10         20         30         40        50        
CCGAUGACGUAAUCGAUC-     -   A   -| U        UG      A  UGGCU 
                   GCCGA UAU CGC AG AAGUUGAC  AGUCCC GG     \
                   CGGCU GUA GCG UC UUCAACUG  UCAGGG CC     A
AAGCAGACGCAACGAAUGC     C   C   C^ -        CA      A  UUAGU 
     110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Eba-Mir-1990-P2_5p*
mirBase accessionNone
Sequence 
0- AGUAAGUUGACUGAGUCCCAGG -22
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Mature sequence

Eba-Mir-1990-P2_3p
mirBase accessionNone
Sequence 
35- AGGGACUACGUCAACUUCUCGC -57
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