MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-12598-P2b

Family name MIR-12598 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-12598-P1a  Ava-Mir-12598-P1b  Ava-Mir-12598-P2a  Ava-Mir-12598-P3  Ava-Mir-12598-P4a  Ava-Mir-12598-P4b  Ava-Mir-12598-P5a  Ava-Mir-12598-P5b  Ava-Mir-12598-P6a  Ava-Mir-12598-P6b  Ava-Mir-12598-P7a  Ava-Mir-12598-P7b 
Orthologues Bpl-Mir-12598-P2b 
Node of Origin (locus) A. vaga
Node of Origin (family) Rotifera
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075494.1: 15756552-15756629 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-12598-P2b)		 Mir-12598-P2b CP075494.1: 15756552-15756629 [-] Ensembl
Mir-12598-P6a CP075494.1: 15756680-15756749 [-] Ensembl
Mir-12598-P4b CP075494.1: 15756821-15756880 [-] Ensembl
Seed ACUGUUC
Precursor
(pre-Mir +30nt flank)		 
CUACACGAUGUUCAUACAAGCACAGAGAAAAACUGUUCAUCUAGCCUCGCCUUGGAAUUUAUAUAUAUUUAUUAAAUAUAAAAGGCGGGAGCAGAUUGCGACAGUCAUUAAAUGUGCUUAUAAUCGACGAAUAUUUAU
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Structure
        10          20        30          40         50        60       
CUACACGAUGUUCAUAC--       GAG  AA      - -|   A  -       UGGAAUUUAUAUAU 
                   AAGCACA   AA  ACUGUU C AUCU GC CUCGCCU              A
                   UUCGUGU   UU  UGACAG G UAGA CG GGGCGGA              U
UAUUUAUAAGCAGCUAAUA       AAA  AC      C U^   -  A       AAAUAUAAAUUAUU 
      130       120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To
Mature sequence

Ava-Mir-12598-P2b_5p
mirBase accessionNone
Sequence 
0- AACUGUUCAUCUAGCCUCGCCU -22
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Star sequence

Ava-Mir-12598-P2b_3p*
mirBase accessionNone
Sequence 
54- GCGGGAGCAGAUUGCGACAGUCAU -78
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