MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-12598-P5b

Family name MIR-12598 (all species)
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-12598-P1a  Ava-Mir-12598-P1b  Ava-Mir-12598-P2a  Ava-Mir-12598-P2b  Ava-Mir-12598-P3  Ava-Mir-12598-P4a  Ava-Mir-12598-P4b  Ava-Mir-12598-P5a  Ava-Mir-12598-P6a  Ava-Mir-12598-P6b  Ava-Mir-12598-P7a  Ava-Mir-12598-P7b 
Orthologues
Node of Origin (locus) A. vaga
Node of Origin (family) Rotifera
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075492.1: 12548457-12548519 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-12598-P5b)		 Novel-6-P2 CP075492.1: 12548112-12548173 [-] Ensembl
Mir-12598-P1b CP075492.1: 12548233-12548292 [-] Ensembl
Mir-12598-P7a CP075492.1: 12548345-12548405 [-] Ensembl
Mir-12598-P5b CP075492.1: 12548457-12548519 [-] Ensembl
Novel-2-P2 CP075492.1: 12548571-12548628 [-] Ensembl
Seed CACUGUU
Precursor
(pre-Mir +30nt flank)		 
AUCGGUUAGUUUUUAUUUCUUCACGCACUUUCACUGUUCGAUGUGCCUCCCUUGGGUACAUGAAAAGACUAGGGAGAUGCAGGGACGGUGAUAAUGCGUAUAAGAAAGCAAAUCUUUUUUUAU
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Structure
        10         20         30        40        50        60 
AUCGGUUAGUUUUUAUU-    C-|    CUU         GA   GC      UGGGUACA 
                  UCUU  ACGCA   UCACUGUUC  UGU  CUCCCU        U
                  AGAA  UGCGU   AGUGGCAGG  ACG  GAGGGA        G
UAUUUUUUUCUAAACGAA    UA^    AAU         G-   UA      UCAGAAAA 
 120       110       100        90         80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
- +
To To
Mature sequence

Ava-Mir-12598-P5b_5p
mirBase accessionNone
Sequence 
0- UCACUGUUCGAUGUGCCUCCCUU -23
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Star sequence

Ava-Mir-12598-P5b_3p*
mirBase accessionNone
Sequence 
42- GGAGAUGCAGGGACGGUGAUA -63
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