| MirGeneDB ID | Bta-Mir-590 |
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| Family name |
MIR-590 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cfa-Mir-590
Dno-Mir-590
Eca-Mir-590
Hsa-Mir-590
Mml-Mir-590
Mmr-Mir-590
Oan-Mir-590
Ocu-Mir-590
Pab-Mir-590
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| Node of Origin (locus) |
Mammalia
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| Node of Origin (family) |
Mammalia
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037352.1: 33202661-33202721 [-]
UCSC
Ensembl
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| Seed |
AGUUUUA |
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Precursor
(pre-Mir +30nt flank) |
UUACCCCAGAUCCUAUAGCCAGUCAGAAACGAGCUUAUUCACAGAAGUACAGCAUAACCCAGUAGACCUGUAGUUUUAUGUGUAAGCUCGUUUCUGAUUGAAAAGUGCAGCAAAGUCAUCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUACCCCAGAUCCUAUAGC--| U C G GCAUAACC
CAGUCAGAAACGAGCUUAU CA AGAA UACA \
GUUAGUCUUUGCUCGAAUG GU UUUU AUGU C
UCUACUGAAACGACGUGAAAA^ U A G CCAGAUGA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-590_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- GAGCUUAUUCACAGAAGUACA -21
Get sequence
|
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| Mature sequence |
Bta-Mir-590_3p |
| mirBase accession | None |
|---|
| Sequence |
40- UAGUUUUAUGUGUAAGCUCGU -61
Get sequence
|
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