| MirGeneDB ID | Mmr-Mir-590 |
|---|
| Family name |
MIR-590 (all species) |
|---|
| Species |
Gray mouse lemur (Microcebus murinus) |
|---|
| MiRBase ID |
mmr-mir-590
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-590
Cfa-Mir-590
Dno-Mir-590
Eca-Mir-590
Hsa-Mir-590
Mml-Mir-590
Oan-Mir-590
Ocu-Mir-590
Pab-Mir-590
|
|---|
| Node of Origin (locus) |
Mammalia
|
|---|
| Node of Origin (family) |
Mammalia
|
|---|
Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007677.1: 33499494-33499554 [+]
UCSC
Ensembl
|
|---|
| Seed |
AAUUUUA |
|---|
Precursor
(pre-Mir +30nt flank) |
UUUUUAAAAGUCCUAUAGCCAGUCAGAAAUGAGCUUAUUCAUAAAAGUACAGUAUGAUCCAGUAAACCUGUAAUUUUAUGUAUAAGCUAGUCUCUGAUUGAAACAUGCAACAAAUGUCUUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUUUAAAAGUCCUAUAGC--| A G U G UAUGAUC
CAGUCAGA AU AGCUUAU CAUAAAA UACAG \
GUUAGUCU UG UCGAAUA GUAUUUU AUGUC C
CUUCUGUAAACAACGUACAAA^ C A U A CAAAUGA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Mmr-Mir-590_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GAGCUUAUUCAUAAAAGUACAG -22
Get sequence
|
|---|
| Mature sequence |
Mmr-Mir-590_3p |
| mirBase accession | MIMAT0049174 |
|---|
| Sequence |
40- UAAUUUUAUGUAUAAGCUAGU -61
Get sequence
|
|---|
