| MirGeneDB ID | Bta-Mir-7180 |
|---|
| Family name |
MIR-7180 (all species) |
|---|
| Species |
Cow (Bos taurus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cfa-Mir-7180
Cja-Mir-7180
Dno-Mir-7180
Mml-Mir-7180
Ocu-Mir-7180
Pab-Mir-7180
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037343.1: 32263798-32263855 [-]
UCSC
Ensembl
|
|---|
| Seed |
GUGGCCU |
|---|
Precursor
(pre-Mir +30nt flank) |
GAGACUUUCUGAUUAUUGGUGGUCUCAGGGAGUGUACUUCCUGGGGCCUCUGGGCAUAUAAUUCCUGUGGCCUCUGGGUGUGUACCCUCUGUGGCUUCCAGGUUUGGACAGCUGCAGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAGACUUUCUGAUUAUU--| U U A U U UCU GCAU
GG GGUC CAGGG GUGUAC UCC GGGGCC GG A
CC UCGG GUCUC CAUGUG GGG CUCCGG CC U
CGACGUCGACAGGUUUGGA^ U U C U U UGU UUAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Bta-Mir-7180_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGUGUACUUCCUGGGGCCUCUGG -23
Get sequence
|
|---|
| Mature sequence |
Bta-Mir-7180_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UGUGGCCUCUGGGUGUGUACCCU -58
Get sequence
|
|---|
