MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-7180

Family name MIR-7180 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-7180  Cfa-Mir-7180  Dno-Mir-7180  Mml-Mir-7180  Ocu-Mir-7180  Pab-Mir-7180 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021933.1: 37485462-37485519 [-] UCSC Ensembl
Seed GGCCUCU
Precursor
(pre-Mir +30nt flank)		 
GAGGCUUUCUGAGGAUUGGUGGUUUCAGGGAGUGUACUUCCUGAGGCCUCUGGGUAUAAAAUUACUGUGGCCUCUGGGUGUGUACCCUCUGCGGCUUCCAGAUUCCUACAUCCUGCAG
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Structure
        10          20        30        40        50        
GAGGCUUUCUGAGGAUU--| U   UU     A      U   U      UCUGGGUAU 
                   GG GGU  CAGGG GUGUAC UCC GAGGCC         A
                   CC UCG  GUCUC CAUGUG GGG CUCCGG         A
GACGUCCUACAUCCUUAGA^ U   GC     C      U   U      UGUCAUUAA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Cja-Mir-7180_5p*
mirBase accessionNone
Sequence 
0- AGUGUACUUCCUGAGGCCUCU -21
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Mature sequence

Cja-Mir-7180_3p
mirBase accessionNone
Sequence 
37- UGGCCUCUGGGUGUGUACCCU -58
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