| MirGeneDB ID | Dno-Mir-7180 |
|---|
| Family name |
MIR-7180 (all species) |
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| Species |
Nine-banded armadillo (Dasypus novemcinctus) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-7180
Cfa-Mir-7180
Cja-Mir-7180
Mml-Mir-7180
Ocu-Mir-7180
Pab-Mir-7180
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(dasNov3) |
JH563092: 1728287-1728346 [+]
UCSC
Ensembl
|
|---|
| Seed |
GUGGCCU |
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Precursor
(pre-Mir +30nt flank) |
AGGCUGUCCGAGGGUUGGGUGGUCUCGGGGAGGGUACUUCCUGGGGCCUCUGGGCAUGGACUUCCUGUGGCCUCUGGGUGUGUACCCUCUGUGGCUUCCAGUUUCCUACUUCUCGCAGCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGGCUGUCCGAGGGUUG----| U UC G UU- UG - UCU GCAU
GG GGUC G GGAGGGUAC CC G GGCC GG G
CC UCGG U UCUCCCAUG GG C CCGG CC G
UCGACGCUCUUCAUCCUUUGA^ U -- G UGU GU U UGU UUCA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Dno-Mir-7180_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGGGUACUUCCUGGGGCCUCUGG -23
Get sequence
|
|---|
| Mature sequence |
Dno-Mir-7180_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
35- UGUGGCCUCUGGGUGUGUACCCUCU -60
Get sequence
|
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