MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-130-P2b

Family name MIR-130 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-301a
Paralogues Cfa-Mir-130-P1c  Cfa-Mir-130-P2a  Cfa-Mir-130-P3b  Cfa-Mir-130-P4a 
Orthologues Aca-Mir-130-P2b  Ami-Mir-130-P2b  Bta-Mir-130-P2b  Cja-Mir-130-P2b  Cli-Mir-130-P2b  Cmi-Mir-130-P2b  Cpi-Mir-130-P2b  Cpo-Mir-130-P2b  Dno-Mir-130-P2b  Dre-Mir-130-P2b1  Eca-Mir-130-P2b  Ete-Mir-130-P2b  Gga-Mir-130-P2b  Gja-Mir-130-P2b  Gmo-Mir-130-P2b1  Hsa-Mir-130-P2b  Laf-Mir-130-P2b  Lch-Mir-130-P2b  Loc-Mir-130-P2b  Mal-Mir-130-P2b2  Mdo-Mir-130-P2b  Mml-Mir-130-P2b  Mmr-Mir-130-P2b  Mmu-Mir-130-P2b  Mun-Mir-130-P2b  Oan-Mir-130-P2b  Ocu-Mir-130-P2b  Pab-Mir-130-P2b  Pbv-Mir-130-P2b  Rno-Mir-130-P2b  Sha-Mir-130-P2b  Spt-Mir-130-P2b  Sto-Mir-130-P2b  Tgu-Mir-130-P2b  Xla-Mir-130-P2b3  Xla-Mir-130-P2b4  Xtr-Mir-130-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(canFam3_add)		 chr9: 33724582-33724643 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-130-P2b)		 Mir-130-P3b chr9: 33714194-33714258 [-] UCSC Ensembl
Mir-130-P2b chr9: 33724582-33724643 [-] UCSC Ensembl
Seed AGUGCAA
Precursor
(pre-Mir +30nt flank)		 
UUCCUUUCCUACCAAUUUCUGCUAACGAAUGCUCUGACUUUAUUGCACUACUGUACUUUACAGCUAGCAGUGCAAUAGUAUUGUCAAAGCAUCUGAAAGCAGAAUGCACACCAGAAUUUUGA
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Structure
        10          20        30           40        50         
UUCCUUUCCUACCAAUU--      AA  A     C    U---|         A  GUACUU 
                   UCUGCU  CG AUGCU UGAC    UUAUUGCACU CU      \
                   AGACGA  GU UACGA ACUG    GAUAACGUGA GA      U
AGUUUUAAGACCACACGUA      AA  C     A    UUAU^         C  UCGACA 
120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-130-P2b_5p*
mirBase accessionNone
Sequence 
0- GCUCUGACUUUAUUGCACUACU -22
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Mature sequence

Cfa-Mir-130-P2b_3p
mirBase accessionMIMAT0009853
Sequence 
37- CAGUGCAAUAGUAUUGUCAAAGCAU -62
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Proposed targets TargetScanVert: cfa-miR-301a
miRDB: MIMAT0009853