MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-187

Family name MIR-187 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-187
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cja-Mir-187  Cli-Mir-187  Cpi-Mir-187  Dno-Mir-187  Dre-Mir-187  Eca-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Laf-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmr-Mir-187  Mmu-Mir-187  Mun-Mir-187  Neu-Mir-187  Oan-Mir-187  Ocu-Mir-187  Pab-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(cavPor3)		 scaffold_14: 28433765-28433822 [+] UCSC
Seed CGUGUCU
Precursor
(pre-Mir +30nt flank)		 
UCUGAGCUCAUGAUACAGUGUGAGUCCUUGGGCUACAACACAGGACCCGGGCGCUGAUUUGACCCCUCGUGUCUUGUGUUGCAGCCGGAGGGACACAGGUCUGCAGCAGAGCCUGCUC
Get precursor sequence
Structure
        10           20        30        40        50        
UCUGAGCUCAUGAUACAG---|   AG     G    A           C    CGCUGA 
                     UGUG  UCCUU GGCU CAACACAGGAC CGGG      U
                     ACAC  GGGAG CCGA GUUGUGUUCUG GCUC      U
CUCGUCCGAGACGACGUCUGG^   A-     G    C           U    CCCAGU 
      110       100         90        80        70        60
Deep sequencing
Go to detailed chart
CommentThe 3' end of the 3p arm is also likely monoadenylated when not monouridylated despite the templated adenosine.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-187_5p* (predicted)
mirBase accessionMIMAT0047058
Sequence 
0- GGCUACAACACAGGACCCGGGC -22
Get sequence
Mature sequence

Cpo-Mir-187_3p
mirBase accessionMIMAT0047059
Sequence 
36- UCGUGUCUUGUGUUGCAGCCGG -58
Get sequence