| MirGeneDB ID | Mml-Mir-187 |
|---|
| Family name |
MIR-187 (all species) |
|---|
| Species |
Rhesus monkey (Macaca mulatta) |
|---|
| MiRBase ID |
mml-mir-187
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aca-Mir-187
Ami-Mir-187
Bta-Mir-187
Cfa-Mir-187
Cja-Mir-187
Cli-Mir-187
Cpi-Mir-187
Cpo-Mir-187
Dno-Mir-187
Dre-Mir-187
Eca-Mir-187
Ete-Mir-187
Gga-Mir-187
Gja-Mir-187
Gmo-Mir-187
Hsa-Mir-187
Laf-Mir-187
Lch-Mir-187
Loc-Mir-187
Mal-Mir-187
Mdo-Mir-187
Mmr-Mir-187
Mmu-Mir-187
Mun-Mir-187
Neu-Mir-187
Oan-Mir-187
Ocu-Mir-187
Pab-Mir-187
Rno-Mir-187
Sha-Mir-187
Spt-Mir-187
Tgu-Mir-187
Tni-Mir-187
Xtr-Mir-187
|
|---|
| Node of Origin (locus) |
Osteichthyes
|
|---|
| Node of Origin (family) |
Osteichthyes
|
|---|
Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014353.1: 46619141-46619198 [+]
UCSC
Ensembl
|
|---|
| Seed |
CGUGUCU |
|---|
Precursor
(pre-Mir +30nt flank) |
AGGCUCACUAUGACACAGUGUGAGACCUCGGGCUACAACACAGGACCCGGGUGCUGCUCUGACCCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCAGGUCCGCAGCAGAGCCUGUUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGGCUCACUAUGACACAG---| AGA G A C UGCUGC
UGUG CCUC GGCU CAACACAGGAC CGGG U
ACGC GGAG CCGA GUUGUGUUCUG GCUC C
CUUGUCCGAGACGACGCCUGG^ AG- G C U CCCAGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | The 3' end of the 3p arm is also likely monoadenylated when not monouridylated despite the templated adenosine. |
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Mml-Mir-187_5p* |
| mirBase accession | MIMAT0026833 |
|---|
| Sequence |
0- GGCUACAACACAGGACCCGGGU -22
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-187-5p
|
|---|
| Mature sequence |
Mml-Mir-187_3p |
| mirBase accession | MIMAT0006221 |
|---|
| Sequence |
36- UCGUGUCUUGUGUUGCAGCCGG -58
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-187-3p
|
|---|
