MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-187

Family name MIR-187 (all species)
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-187
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cja-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Eca-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Laf-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmr-Mir-187  Mmu-Mir-187  Mun-Mir-187  Neu-Mir-187  Oan-Mir-187  Ocu-Mir-187  Pab-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(danRer11)		 chr19: 34135627-34135688 [+] UCSC Ensembl
Seed CGUGUCU
Precursor
(pre-Mir +30nt flank)		 
GAGACGAAGGUGACCUGUGGCUGGGCCAGGGGCUGCAACACAGGACAUGGGAGCUGUCUCUCACUCCCGCUCGUGUCUUGUGUUGCAGCCAGUGGAACGGCUACACUGUCCACAUCUGAGAC
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Structure
        10          20        30        40        50        60
GAGACGAAGGUGACCUG--|     GG   GG                     AGCUGUCU 
                   UGGCUG  CCA  GGCUGCAACACAGGACAUGGG        C
                   AUCGGC  GGU  CCGACGUUGUGUUCUGUGCUC        U
CAGAGUCUACACCUGUCAC^     AA   GA                     GCCCUCAC 
120       110       100        90        80        70
Deep sequencing
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CommentThe 3' end of the 3p arm is also monouridylated when not monoadenylated despite the templated uridine.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-187_5p*
mirBase accessionNone
Sequence 
0- GGCUGCAACACAGGACAUGGGA -22
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Mature sequence

Dre-Mir-187_3p
mirBase accessionMIMAT0001274
Sequence 
40- UCGUGUCUUGUGUUGCAGCCAG -62
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Proposed targets TargetScanFish: dre-miR-187