MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-187

Family name MIR-187 (all species)
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cja-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Dre-Mir-187  Eca-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Laf-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmr-Mir-187  Mmu-Mir-187  Neu-Mir-187  Oan-Mir-187  Ocu-Mir-187  Pab-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCA_901765095.2_aMicUni1.2)		 LR594632.1: 228195431-228195488 [+]
Seed CGUGUCU
Precursor
(pre-Mir +30nt flank)		 
UAAUUUCCUGUGACUCAGUGUGAUACCUCCGGCUACAACACAGGACAUGAGAACUUUCUUGGACGCUCGUGUCUUGUGUUGCAGCCAGAGGGGCACAUCUUCUGAACAUGAGACAUCC
Get precursor sequence
Structure
        10           20        30        40        50        
UAAUUUCCUGUGACUCA---|    AUA    C    A                AACUUU 
                    GUGUG   CCUC GGCU CAACACAGGACAUGAG      C
                    UACAC   GGAG CCGA GUUGUGUUCUGUGCUC      U
CCUACAGAGUACAAGUCUUC^    GG-    A    C                GCAGGU 
      110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
- +
To
Star sequence

Mun-Mir-187_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGCUACAACACAGGACAUGAGA -22
Get sequence
Mature sequence

Mun-Mir-187_3p
mirBase accessionNone
Sequence 
36- UCGUGUCUUGUGUUGCAGCCAG -58
Get sequence