MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-17-P4e

Family name MIR-17 (all species)
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-17-P1e  Ebu-Mir-17-P2e  Ebu-Mir-17-P3e  Ebu-Mir-17-P3f-v1 
Orthologues
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02010694.1: 1553249-1553308 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-17-P4e)		 Mir-17-P1e FYBX02010694.1: 1552137-1552201 [+] UCSC Ensembl
Mir-17-P2e FYBX02010694.1: 1552447-1552509 [+] UCSC Ensembl
Mir-17-P3e FYBX02010694.1: 1552582-1552644 [+] UCSC Ensembl
Mir-17-P4e FYBX02010694.1: 1553249-1553308 [+] UCSC Ensembl
Mir-19-P2e FYBX02010694.1: 1553451-1553512 [+] UCSC Ensembl
Mir-92-P1e FYBX02010694.1: 1553862-1553920 [+] UCSC Ensembl
Mir-92-P2e FYBX02010694.1: 1554002-1554063 [+] UCSC Ensembl
Seed AAAGUGC
Precursor
(pre-Mir +30nt flank)		 
CUUCUGUCCUACUGUGUAUUCUCGCAGUACCAAAGUGCUUGUAGUGCAGGUAGCAGUUUAAAAAGCUACUGCAAUACCAGCACUUUUAGUAUUGUGAGGGGAAUAAGUUCCUGCACGUUU
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Structure
        10          20        30         40        50         
CUUCUGUCCUACUGUGUA--            C-|       U   G     G   CAGUU 
                    UUCUCGCAGUAC  AAAGUGCU GUA UGCAG UAG     U
                    GGGAGUGUUAUG  UUUCACGA CAU ACGUC AUC     A
UUUGCACGUCCUUGAAUAAG            AU^       C   A     -   GAAAA 
.       110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Mature sequence

Ebu-Mir-17-P4e_5p
mirBase accessionNone
Sequence 
0- CAAAGUGCUUGUAGUGCAGGUAG -23
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Star sequence

Ebu-Mir-17-P4e_3p* (predicted)
mirBase accessionNone
Sequence 
37- ACUGCAAUACCAGCACUUUUAGU -60
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