MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-599

Family name MIR-599 (all species)
Species Horse (Equus caballus)
MiRBase ID
Paralogues
Orthologues Ami-Mir-599  Bta-Mir-599  Cfa-Mir-599  Cja-Mir-599  Cli-Mir-599  Cpi-Mir-599  Ete-Mir-599  Hsa-Mir-599  Laf-Mir-599  Lch-Mir-599  Mdo-Mir-599  Mml-Mir-599  Mmr-Mir-599  Mmu-Mir-599  Mun-Mir-599  Neu-Mir-599  Oan-Mir-599  Ocu-Mir-599  Pab-Mir-599  Pbv-Mir-599  Sha-Mir-599  Spt-Mir-599  Tgu-Mir-599 
Node of Origin (locus) Sarcopterygii
Node of Origin (family) Sarcopterygii
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009156.1: 47139795-47139853 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-599)		 Mir-599 CM009156.1: 47139795-47139853 [-] UCSC Ensembl
Mir-875 CM009156.1: 47139942-47139998 [-] UCSC Ensembl
Seed UUGAUAA
Precursor
(pre-Mir +30nt flank)		 
CACUGCCACAGACAUGCUGUCCACAGUGUGUUUGAUAAGCUGACAUGGGACAGGGACUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGACGACUGUCAGUUCAGUUAGAG
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Structure
        10          20         30        40        50         
CACUGCCACAGACAUGC--      CA-|  U                 GG    GGGACU 
                   UGUCCA   GUG GUUUGAUAAGCUGACAU  GACA      C
                   GCAGGU   UAC CAAACUAUUUGACUGUG  UUGU      U
GAGAUUGACUUGACUGUCA      CCA^  C                 --    CACUUU 
       110       100        90        80          70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-599_5p (predicted)
mirBase accessionNone
Sequence 
0- UUUGAUAAGCUGACAUGGGACA -22
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Star sequence

Eca-Mir-599_3p* (predicted)
mirBase accessionNone
Sequence 
38- UUGUGUCAGUUUAUCAAACCC -59
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