MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-599

Family name MIR-599 (all species)
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Ami-Mir-599  Bta-Mir-599  Cfa-Mir-599  Cja-Mir-599  Cli-Mir-599  Cpi-Mir-599  Eca-Mir-599  Ete-Mir-599  Hsa-Mir-599  Laf-Mir-599  Lch-Mir-599  Mdo-Mir-599  Mml-Mir-599  Mmr-Mir-599  Mmu-Mir-599  Mun-Mir-599  Neu-Mir-599  Oan-Mir-599  Ocu-Mir-599  Pab-Mir-599  Pbv-Mir-599  Spt-Mir-599  Tgu-Mir-599 
Node of Origin (locus) Sarcopterygii
Node of Origin (family) Sarcopterygii
Genome context
(DEVIL_add)		 GL841372.1: 966959-967017 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-599)		 Mir-599 GL841372.1: 966959-967017 [-] UCSC Ensembl
Mir-875 GL841372.1: 967114-967170 [-] UCSC Ensembl
Seed UUGAUAA
Precursor
(pre-Mir +30nt flank)		 
CAGUGAAAAGGAUGAAGUGUCCAGAGUGUGUUUGAUAAGCUGAUAUGGGACAGGGAUUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGACGCCAGUUACAGUUAAGGAGU
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Structure
        10          20          30        40        50         
CAGUGAAAAGGAUGAAGU--      A    --|                GG     GGAUU 
                    GUCCAG GUGU  GUUUGAUAAGCUGAUAU  GACAG     C
                    CAGGUC CAUA  CAAACUAUUUGACUGUG  UUGUC     U
UGAGGAAUUGACAUUGACCG      -    CC^                --     ACUUU 
       110       100         90        80          70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-599_5p
mirBase accessionNone
Sequence 
0- UUUGAUAAGCUGAUAUGGGACAG -23
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Star sequence

Sha-Mir-599_3p* (predicted)
mirBase accessionNone
Sequence 
37- GUUGUGUCAGUUUAUCAAACCC -59
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