MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-71-P4

Family name MIR-71 (all species)
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-71-P5 
Orthologues Aae-Mir-71  Aga-Mir-71  Agr-Mir-71  Asu-Mir-71  Bfl-Mir-71  Bge-Mir-71  Bla-Mir-71  Cbr-Mir-71  Cel-Mir-71  Cte-Mir-71  Dgr-Mir-71  Dlo-Mir-71  Dma-Mir-71  Dpu-Mir-71  Egr-Mir-71  Esc-Mir-71  Hme-Mir-71  Hru-Mir-71  Isc-Mir-71  Lgi-Mir-71  Lhy-Mir-71  Llo-Mir-71  Mgi-Mir-71  Mom-Mir-71  Npo-Mir-71  Obi-Mir-71  Ofu-Mir-71  Ovu-Mir-71  Pau-Mir-71  Pca-Mir-71  Pdu-Mir-71  Pfl-Mir-71  Ple-Mir-71  Pmi-Mir-71  Pve-Mir-71  Rph-Mir-71  Sko-Mir-71  Sme-Mir-71-o4  Snu-Mir-71  Spu-Mir-71  Tca-Mir-71  War-Mir-71 
Node of Origin (locus) L. anatina
Node of Origin (family) Nephrozoa
Genome context
(LinAna_1.0)		 LFEI01002046: 27476-27533 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-71-P4)		 Mir-71-P4 LFEI01002046: 27476-27533 [+] Ensembl
Mir-2-o106a LFEI01002046: 29074-29133 [+] Ensembl
Mir-2-o101a LFEI01002046: 29414-29471 [+] Ensembl
Mir-2-o101b LFEI01002046: 29414-29471 [+] Ensembl
Mir-2-o107 LFEI01002046: 30083-30141 [+] Ensembl
Seed GAAAGAC
Precursor
(pre-Mir +30nt flank)		 
UUAAAAAAAACGGCGUAUGUUAUUUCUGUGUGAAAGACAUGGGUAGUGAGAUGCUGUACUUGUGUACCUCACUACCGUGUCUUUUGCAUGGAGAUGACACAAGAUACAGGCUGCCUUG
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Structure
        10          20        30        40        50         
UUAAAAAAAACGGCGUA--|            UG          G       A  CUGUA 
                   UGUUAUUUCUGUG  AAAGACAUGG UAGUGAG UG     \
                   ACAGUAGAGGUAC  UUUCUGUGCC AUCACUC AU     C
GUUCCGUCGGACAUAGAAC^            GU          -       C  GUGUU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To To
Mature sequence

Lan-Mir-71-P4_5p
mirBase accessionNone
Sequence 
0- UGAAAGACAUGGGUAGUGAGAUG -23
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Star sequence

Lan-Mir-71-P4_3p*
mirBase accessionNone
Sequence 
36- CCUCACUACCGUGUCUUUUGCA -58
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