MirGeneDB 3.0
MirGeneDB ID

Mom-Mir-1994-P1

Family name MIR-1994 (all species)
Species Mossy chiton (Mopalia muscosa)
MiRBase ID
Paralogues Mom-Mir-1994-P2 
Orthologues Agr-Mir-1994-P1  Cte-Mir-1994  Dgr-Mir-1994  Eba-Mir-1994-P1  Efe-Mir-1994  Esc-Mir-1994-P1  Hru-Mir-1994-P1  Lan-Mir-1994-o1a  Lan-Mir-1994-o1b  Lgi-Mir-1994-P1  Lhy-Mir-1994-P1  Llo-Mir-1994  Mgi-Mir-1994-P1  Npo-Mir-1994-P1  Obi-Mir-1994-P1  Ovu-Mir-1994-P1  Pve-Mir-1994-P1  Rph-Mir-1994-P1  War-Mir-1994-P1 
Node of Origin (locus) Mollusca
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_031763545.1_ASM3176354v1_genomic_Mom)		 JARFOD010082043.1: 6300-6358 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1994-P1)		 Mir-1994-P2 JARFOD010082043.1: 5738-5789 [-] Ensembl
Mir-1994-P1 JARFOD010082043.1: 6300-6358 [-] Ensembl
Seed GAGACAG
Precursor
(pre-Mir +30nt flank)		 
UGAUGGAUGAAGAAUUAACGUGCUGUGGUUGGAGAGGUCAUUCUGUUCUACAUGUGUACAUGAUUGCAUGAGACAGUGUGUCCUCCCUUGUUACGGCACAGAGUAUACUCCCUUGUGAC
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Structure
        10         20        30         40        50        60
UGAUGGAUGAAGAAUUAAC-       GG U-| A    U   U    U  A    UGUAC 
                    GUGCUGU  U  GG GAGG CAU CUGU CU CAUG     A
                    CACGGCA  G  CC CUCC GUG GACA GA GUAC     U
CAGUGUUCCCUCAUAUGAGA       UU UU^ -    U   U    -  -    GUUAG 
       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
To
Star sequence

Mom-Mir-1994-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGAGAGGUCAUUCUGUUCUACAUG -24
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Mature sequence

Mom-Mir-1994-P1_3p
mirBase accessionNone
Sequence 
38- UGAGACAGUGUGUCCUCCCUU -59
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