MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-1994-P1

Family name MIR-1994 (all species)
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-1994-P2a  Pve-Mir-1994-P2b 
Orthologues Agr-Mir-1994-P1  Cte-Mir-1994  Dgr-Mir-1994  Eba-Mir-1994-P1  Efe-Mir-1994  Esc-Mir-1994-P1  Hru-Mir-1994-P1  Lan-Mir-1994-o1a  Lan-Mir-1994-o1b  Lgi-Mir-1994-P1  Lhy-Mir-1994-P1  Llo-Mir-1994  Mgi-Mir-1994-P1  Mom-Mir-1994-P1  Npo-Mir-1994-P1  Obi-Mir-1994-P1  Ovu-Mir-1994-P1  Rph-Mir-1994-P1  War-Mir-1994-P1 
Node of Origin (locus) Mollusca
Node of Origin (family) Lophotrochozoa
Genome context
(Pve_genome_chr_only)		 Pve_Chr3: 123318788-123318848 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1994-P1)		 Mir-1994-P2b Pve_Chr3: 123307801-123307859 [-] Ensembl
Mir-1994-P2a Pve_Chr3: 123318460-123318515 [-] Ensembl
Mir-1994-P1 Pve_Chr3: 123318788-123318848 [-] Ensembl
Seed GAGACAG
Precursor
(pre-Mir +30nt flank)		 
AGAGCGGGAUGAGACAUAAGGAGCGAUUCAGGGGAGGUCAUUCUCGUCUGCAUGCAUAAAACAUUAACAUGAGACAGUGUGUCCUCCCUUGUGUCGUUUACUGCUUAACGGCAUGGCGAUU
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Structure
        10        20          30        40        50        60 
AGAGCGGGAUGAGACAUAAG--|      U         U   U  C    G    CAUAAA 
                      GAGCGAU CAGGGGAGG CAU CU GUCU CAUG      \
                      UUUGCUG GUUCCCUCC GUG GA CAGA GUAC      A
UUAGCGGUACGGCAAUUCGUCA^      U         U   U  -    -    AAUUAC 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Pve-Mir-1994-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGGGAGGUCAUUCUCGUCUGCAUG -24
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Mature sequence

Pve-Mir-1994-P1_3p
mirBase accessionNone
Sequence 
39- UGAGACAGUGUGUCCUCCCUUG -61
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