| MirGeneDB ID | Pab-Mir-185 |
|---|
| Family name |
MIR-185 (all species) |
|---|
| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-185
Cfa-Mir-185
Cja-Mir-185
Cpo-Mir-185
Dno-Mir-185
Eca-Mir-185
Ete-Mir-185
Hsa-Mir-185
Laf-Mir-185
Mml-Mir-185
Mmr-Mir-185
Mmu-Mir-185
Ocu-Mir-185
Rno-Mir-185
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM068844.1: 28061364-28061419 [-]
UCSC
Ensembl
|
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| Seed |
GGAGAGA |
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Precursor
(pre-Mir +30nt flank) |
UGUGCCUGGCUCGAGCAGGGGGCGAGGGAUUGGAGAGAAAGGCAGUUCCUGAUGGUCCCCUCCCCAGGGGCUGGCUUUCCUCUGGUCCUUCCCUCCCAAUGACCGCGUCUUCGUCG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGUGCCUGGCUCGAGCA--| C UG A G AUGGUC
GGGGG GAGGGAU GAG GAAAG CAGUUCCUG \
CCCUC CUUCCUG CUC CUUUC GUCGGGGAC C
GCUGCUUCUGCGCCAGUAA^ C GU - G CCCUCC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Pab-Mir-185_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGGAGAGAAAGGCAGUUCCUGA -22
Get sequence
|
|---|
| Star sequence |
Pab-Mir-185_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- AGGGGCUGGCUUUCCUCUGGU -56
Get sequence
|
|---|
