MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-185

Family name MIR-185 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-185  Cfa-Mir-185  Cpo-Mir-185  Dno-Mir-185  Eca-Mir-185  Ete-Mir-185  Hsa-Mir-185  Laf-Mir-185  Mml-Mir-185  Mmr-Mir-185  Mmu-Mir-185  Ocu-Mir-185  Pab-Mir-185  Rno-Mir-185 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021915.1: 209262120-209262175 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-185)		 Mir-185 CM021915.1: 209262120-209262175 [+] UCSC Ensembl
Mir-1306 CM021915.1: 209304919-209304979 [+] UCSC Ensembl
Seed GGAGAGA
Precursor
(pre-Mir +30nt flank)		 
UGGGCCUGGCUCGAGCAGGGGGCGAGGGAUUGGAGAGAAAGGCAGUUCCUGAUGGUCCCCUCCCCAGGGGCUGGCUUUCCUCUGGUCCUUCCCUCCCAAUGACCGCGUCUUCGUCG
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Structure
        10          20        30        40        50        
UGGGCCUGGCUCGAGCA--|    C       UG   A     G         AUGGUC 
                   GGGGG GAGGGAU  GAG GAAAG CAGUUCCUG      \
                   CCCUC CUUCCUG  CUC CUUUC GUCGGGGAC      C
GCUGCUUCUGCGCCAGUAA^    C       GU   -     G         CCCUCC 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Cja-Mir-185_5p
mirBase accessionNone
Sequence 
0- UGGAGAGAAAGGCAGUUCCUGA -22
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Star sequence

Cja-Mir-185_3p*
mirBase accessionNone
Sequence 
35- AGGGGCUGGCUUUCCUCUGGU -56
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