MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-185

Family name MIR-185 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-185
Paralogues
Orthologues Bta-Mir-185  Cja-Mir-185  Cpo-Mir-185  Dno-Mir-185  Eca-Mir-185  Ete-Mir-185  Hsa-Mir-185  Laf-Mir-185  Mml-Mir-185  Mmr-Mir-185  Mmu-Mir-185  Ocu-Mir-185  Pab-Mir-185  Rno-Mir-185 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr26: 29296014-29296069 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-185)		 Mir-1306 chr26: 29255668-29255728 [-] UCSC Ensembl
Mir-185 chr26: 29296014-29296069 [-] UCSC Ensembl
Seed GGAGAGA
Precursor
(pre-Mir +30nt flank)		 
CGGGCCUGGCUUGAGUGGGGGGUGAGGGAUUGGAGAGAAAGGCAGUUCCUGAUGGUCCCCUCCCCAGGGGCUGGCUUUCCUCUGGUCCUUCCCUCCCAAUGACCACGUCUUCAUCG
Get precursor sequence
Structure
        10          20        30        40        50        
CGGGCCUGGCUUGAGUG--|    U       UG   A     G         AUGGUC 
                   GGGGG GAGGGAU  GAG GAAAG CAGUUCCUG      \
                   CCCUC CUUCCUG  CUC CUUUC GUCGGGGAC      C
GCUACUUCUGCACCAGUAA^    C       GU   -     G         CCCUCC 
    110       100        90        80         70        60
Deep sequencing
Go to detailed chart
CommentIn dog the highest read count for the Dicer cut for the 3p arm is shifted +1 but the corresponding 5p arm reads are only about ~50% of the read annotated here.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-185_5p
mirBase accessionMIMAT0006660
Sequence 
0- UGGAGAGAAAGGCAGUUCCUGA -22
Get sequence
Proposed targets TargetScanVert: cfa-miR-185
miRDB: MIMAT0006660
Star sequence

Cfa-Mir-185_3p*
mirBase accessionNone
Sequence 
35- AGGGGCUGGCUUUCCUCUGGU -56
Get sequence