MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-370

Family name MIR-370 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-370  Cfa-Mir-370  Cja-Mir-370  Cpo-Mir-370  Eca-Mir-370  Hsa-Mir-370  Mml-Mir-370  Mmr-Mir-370  Mmu-Mir-370  Ocu-Mir-370  Rno-Mir-370 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054694.2: 105337141-105337197 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-370)		 Mir-493 CM054694.2: 105293438-105293499 [+] UCSC Ensembl
Mir-337 CM054694.2: 105300631-105300690 [+] UCSC Ensembl
Mir-431 CM054694.2: 105307145-105307208 [+] UCSC Ensembl
Mir-433 CM054694.2: 105308016-105308089 [+] UCSC Ensembl
Mir-127 CM054694.2: 105309120-105309175 [+] UCSC Ensembl
Mir-432 CM054694.2: 105310618-105310686 [+] UCSC Ensembl
Mir-136 CM054694.2: 105310838-105310893 [+] UCSC Ensembl
Mir-370 CM054694.2: 105337141-105337197 [+] UCSC Ensembl
Seed CCUGCUG
Precursor
(pre-Mir +30nt flank)		 
CGUACAAGUCGGGGCACAAGACAGAGAAGCCAGGUCACGUCUCUGCAGUUACACAGCUCACGAGUGCCUGCUGGGGUGGAACCUGGUCUGUCUGUCUGUCUAACACCAGAGCUCGGG
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Structure
        10          20         30        40        50        
CGUACAAGUCGGGGCACA--|      GA  -      CA GU   U    U   ACAGC 
                    AGACAGA  AG CCAGGU  C  CUC GCAG UAC     \
                    UCUGUCU  UC GGUCCA  G  GGG CGUC GUG     U
GGGCUCGAGACCACAAUCUG^      G-  U      AG UG   U    C   AGCAC 
     110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Li Li
Star sequence

Pab-Mir-370_5p*
mirBase accessionNone
Sequence 
0- CAGGUCACGUCUCUGCAGUUAC -22
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Mature sequence

Pab-Mir-370_3p
mirBase accessionNone
Sequence 
35- GCCUGCUGGGGUGGAACCUGGU -57
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