Mir-432

MirGeneDB ID

Pab-Mir-432

Family name

MIR-432 (all species)

Species

Sumatran orangutan (Pongo abelii)

MiRBase ID

Paralogues

Orthologues

Bta-Mir-432 Cfa-Mir-432 Cja-Mir-432 Cpo-Mir-432 Dno-Mir-432 Eca-Mir-432 Ete-Mir-432 Hsa-Mir-432 Mml-Mir-432 Mmr-Mir-432 Ocu-Mir-432

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)

CM054694.2: 105310618-105310686 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-432)

Mir-770 CM054694.2: 105276468-105276529 [+] UCSC Ensembl
Mir-493 CM054694.2: 105293438-105293499 [+] UCSC Ensembl
Mir-337 CM054694.2: 105300631-105300690 [+] UCSC Ensembl
Mir-431 CM054694.2: 105307145-105307208 [+] UCSC Ensembl
Mir-433 CM054694.2: 105308016-105308089 [+] UCSC Ensembl
Mir-127 CM054694.2: 105309120-105309175 [+] UCSC Ensembl
Mir-432 CM054694.2: 105310618-105310686 [+] UCSC Ensembl
Mir-136 CM054694.2: 105310838-105310893 [+] UCSC Ensembl
Mir-370 CM054694.2: 105337141-105337197 [+] UCSC Ensembl

Seed

CUUGGAG

Precursor
(pre-Mir +30nt flank)

UGGUGUGAACCGUUGCAUGACUCCUCCAGGUCUUGGAGUAGGUCAUUGGGUGGAUCCUCUAUUUCCUUACGUGGGCCACUGGAUGGCUCCUCCAUGUCUUGGAGUAGAUCAGUGGGCAGCUCUUCCAUU

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Structure

        10         20         30        40        50        60    
UGGUGUGAACCGUUGCA-   -| C       UCU     UA       G     AUCCUCUAUU 
                  UGA CU CUCCAGG   UGGAG  GGUCAUU GGUGG          U
                  ACU GA GAGGUUC   ACCUC  UCGGUAG UCACC          C
UUACCUUCUCGACGGGUG   A^ U       UGU     C-       G     GGGUGCAUUC 
       120       110       100        90         80        70

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17)

Tissue expression

Br	Br	Li	Li

Mature sequence

Pab-Mir-432_5p

mirBase accession

None

Sequence

0- UCUUGGAGUAGGUCAUUGGGUGG -23

Get sequence

Star sequence

Pab-Mir-432_3p* (predicted)

mirBase accession

None

Sequence

47- ACUGGAUGGCUCCUCCAUGUCU -69

Get sequence