MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-431

Family name MIR-431 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-431  Cfa-Mir-431  Cja-Mir-431  Cpo-Mir-431  Eca-Mir-431  Ete-Mir-431  Hsa-Mir-431  Laf-Mir-431  Mml-Mir-431  Mmr-Mir-431  Mmu-Mir-431  Ocu-Mir-431  Rno-Mir-431 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054694.2: 105307145-105307208 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-431)		 Mir-770 CM054694.2: 105276468-105276529 [+] UCSC Ensembl
Mir-493 CM054694.2: 105293438-105293499 [+] UCSC Ensembl
Mir-337 CM054694.2: 105300631-105300690 [+] UCSC Ensembl
Mir-431 CM054694.2: 105307145-105307208 [+] UCSC Ensembl
Mir-433 CM054694.2: 105308016-105308089 [+] UCSC Ensembl
Mir-127 CM054694.2: 105309120-105309175 [+] UCSC Ensembl
Mir-432 CM054694.2: 105310618-105310686 [+] UCSC Ensembl
Mir-136 CM054694.2: 105310838-105310893 [+] UCSC Ensembl
Mir-370 CM054694.2: 105337141-105337197 [+] UCSC Ensembl
Seed GUCUUGC
Precursor
(pre-Mir +30nt flank)		 
GCACGUCGUUGUCCUGCUUGUCCUGCGAGGUGUCUUGCAGGCCGUCAUGCAGGCCACACUGACGGUAACGUUGCAGGUCGUCUUGCAGGGCUUCUCGCAAGACGACAUCCUCAUCACCAACGAC
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Structure
        10          20        30        40        50        60 
GCACGUCGUUGUCCUGC--|    C       U          C  UCA    GGCCACACU 
                   UUGUC UGCGAGG GUCUUGCAGG CG   UGCA         G
                   AGCAG ACGCUCU CGGGACGUUC GC   ACGU         A
CAGCAACCACUACUCCUAC^    A       U          U  UGG    UGCAAUGGC 
  120       110       100        90        80        70
Deep sequencing
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CommentThere are multiple Dicer cuts ranging from +1 to +3 on the 3p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-431_5p (predicted)
mirBase accessionNone
Sequence 
0- UGUCUUGCAGGCCGUCAUGCA -21
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Co-mature sequence

Pab-Mir-431_3p
mirBase accessionNone
Sequence 
43- CAGGUCGUCUUGCAGGGCUUC -64
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