MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-370

Family name MIR-370 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-370  Cfa-Mir-370  Cpo-Mir-370  Eca-Mir-370  Hsa-Mir-370  Mml-Mir-370  Mmr-Mir-370  Mmu-Mir-370  Ocu-Mir-370  Pab-Mir-370  Rno-Mir-370 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021924.1: 131718304-131718360 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-370)		 Mir-493 CM021924.1: 131672486-131672548 [+] UCSC Ensembl
Mir-337 CM021924.1: 131682138-131682197 [+] UCSC Ensembl
Mir-431 CM021924.1: 131688487-131688550 [+] UCSC Ensembl
Mir-433 CM021924.1: 131689358-131689431 [+] UCSC Ensembl
Mir-127 CM021924.1: 131690462-131690517 [+] UCSC Ensembl
Mir-432 CM021924.1: 131691960-131692028 [+] UCSC Ensembl
Mir-136 CM021924.1: 131692180-131692235 [+] UCSC Ensembl
Mir-370 CM021924.1: 131718304-131718360 [+] UCSC Ensembl
Seed CCUGCUG
Precursor
(pre-Mir +30nt flank)		 
CGUACAAGUCGGGGCACAAGACAGAGAAGCCAGGUCACGUCUCUGCAGUUACACAGCUCACGAGUGCCUGCUGGGGUGGAACCUGGUCUGUCUGUCUGUCUAACACCAGAGCUGCUG
Get precursor sequence
Structure
        10          20         30        40        50        
CGUACAAGUCGGGGCACA--|      GA  -      CA GU   U    U   ACAGC 
                    AGACAGA  AG CCAGGU  C  CUC GCAG UAC     \
                    UCUGUCU  UC GGUCCA  G  GGG CGUC GUG     U
GUCGUCGAGACCACAAUCUG^      G-  U      AG UG   U    C   AGCAC 
     110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Cja-Mir-370_5p* (predicted)
mirBase accessionNone
Sequence 
0- CAGGUCACGUCUCUGCAGUUAC -22
Get sequence
Mature sequence

Cja-Mir-370_3p (predicted)
mirBase accessionNone
Sequence 
35- GCCUGCUGGGGUGGAACCUGGU -57
Get sequence