MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-1788

Family name MIR-1788 (all species)
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-1788
Paralogues
Orthologues Aca-Mir-1788  Ami-Mir-1788  Cli-Mir-1788  Cmi-Mir-1788  Cpi-Mir-1788  Dre-Mir-1788  Ebu-Mir-1788  Gga-Mir-1788  Gja-Mir-1788  Gmo-Mir-1788  Lch-Mir-1788  Loc-Mir-1788  Mal-Mir-1788  Mun-Mir-1788  Pma-Mir-1788  Spt-Mir-1788  Sto-Mir-1788  Tgu-Mir-1788  Tni-Mir-1788  Xla-Mir-1788-P1  Xla-Mir-1788-P2  Xtr-Mir-1788 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE952971.1: 1064609-1064667 [-]
Clustered miRNAs
(< 50kb from Mir-1788)		 Mir-1788 KE952971.1: 1064609-1064667 [-]
Mir-375 KE952971.1: 1095250-1095307 [-]
Seed AGGCAGC
Precursor
(pre-Mir +30nt flank)		 
CUGCUCUGUACCAUAUACCUACUUGUGCUGGGCUUGUUUUCAGUUGCCUGCGGCUGGCUAAUAUGACUCAGGCAGCUAAAGCAAGUCUGGGGCAUGAAAGGUGAACCGGCAGAAACGAA
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Structure
        10         20         30        40        50         
CUGCUCUGUACCAUAUA-   ACU-|  G UG          C         CGGCUGGC 
                  CCU    UGU C  GGCUUGUUUU AGUUGCCUG        U
                  GGA    ACG G  CUGAACGAAA UCGACGGAC        A
AAGCAAAGACGGCCAAGU   AAGU^  G GU          -         UCAGUAUA 
       110       100        90        80         70        60
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Pbv-Mir-1788_5p*
mirBase accessionMIMAT0039085
Sequence 
0- GGCUUGUUUUCAGUUGCCUGCG -22
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Mature sequence

Pbv-Mir-1788_3p
mirBase accessionMIMAT0039086
Sequence 
38- CAGGCAGCUAAAGCAAGUCUG -59
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