MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-92-P1g

Family name MIR-92 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-92a
Paralogues Pma-Mir-92-P1h  Pma-Mir-92-P1o1  Pma-Mir-92-P2g 
Orthologues Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) P. marinus
Node of Origin (family) Bilateria
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046115.1: 752414-752471 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P1g)		 Mir-17-P1g NC_046115.1: 748761-748823 [+] UCSC Ensembl
Mir-17-P2g NC_046115.1: 749056-749119 [+] UCSC Ensembl
Mir-17-P3g NC_046115.1: 749682-749742 [+] UCSC Ensembl
Mir-19-P1g NC_046115.1: 750373-750438 [+] UCSC Ensembl
Mir-17-P4g NC_046115.1: 751997-752055 [+] UCSC Ensembl
Mir-19-P2g NC_046115.1: 752202-752261 [+] UCSC Ensembl
Mir-92-P1g NC_046115.1: 752414-752471 [+] UCSC Ensembl
Mir-92-P2g NC_046115.1: 754312-754371 [+] UCSC Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
UCUUUAUACAACGCGUUCCCUGUCCCGCUGAGGUCAGGAUGGGCAGCAAUGCGUGACUAGAUCCUGUAUUGCACUCGUCCCGGCCUUAGCGAGAUUUAUCGGGUAUCCGAUCAUUUUC
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Structure
        10        20          30        40        50         
UCUUUAUACAACGCGUUCCCU--|  C          A       CA        UGACU 
                       GUC CGCUGAGGUC GGAUGGG  GCAAUGCG     \
                       UAG GCGAUUCCGG CCUGCUC  CGUUAUGU     A
CUUUUACUAGCCUAUGGGCUAUU^  A          C       A-        CCUAG 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-92-P1g_5p*
mirBase accessionNone
Sequence 
0- AGGUCAGGAUGGGCAGCAAUGCG -23
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Mature sequence

Pma-Mir-92-P1g_3p
mirBase accessionMIMAT0019435
Sequence 
36- UAUUGCACUCGUCCCGGCCUUA -58
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