| MirGeneDB ID | Sne-Mir-12593 |
|---|---|
| Family name | MIR-12593 (all species) |
| Species | Seison (Seison nebaliae) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Ava-Mir-12593-P1a Ava-Mir-12593-P1b Ava-Mir-12593-P2a Ava-Mir-12593-P2b Bko-Mir-12593 Bpl-Mir-12593 Nag-Mir-12593-v1 Ple-Mir-12593 |
| Node of Origin (locus) | Rotifera |
| Node of Origin (family) | Rotifera |
| Genome context (S.nebaliae-strainB-GA2.2-3295Contigs_manual) |
Sne-Mir-12593_manual_assembly: 115-197 [+] Ensembl |
| Seed | AUUCUCU |
| Precursor (pre-Mir +30nt flank) |
UGACGCGUUUGAAACAGCAAUGUAGCUGCUCUCGCAAUUCCAAGGAGUGCAUCAGCACGUUCCAUUCUCUUAUCUGCCAGUGCGet precursor sequence |
| Structure | 10 20 30 40 UGAC--| UU AAC C U - CUC A C GCG UGA AG AAUG AGC UGCU GCA UUC A CGU AUU UC UUAC UUG ACGA CGU GAG A CGUGAC^ CU C-- - C C CUA - G 80 70 60 50 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Sne-Mir-12593_5p* |
| mirBase accession | None |
| Sequence |
0- UGACGCGUUUGAAACAGCAAUG -22
Get sequence
|
| Mature sequence | Sne-Mir-12593_3p |
| mirBase accession | None |
| Sequence |
62- CAUUCUCUUAUCUGCCAGUGC -83
Get sequence
|
