MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-24-P2

Family name MIR-24 (all species)
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-24-P1  Sto-Mir-24-P3  Sto-Mir-24-P4 
Orthologues Aca-Mir-24-P2  Ami-Mir-24-P2  Bta-Mir-24-P2  Cfa-Mir-24-P2  Cja-Mir-24-P2  Cmi-Mir-24-P2  Cpi-Mir-24-P2  Cpo-Mir-24-P2  Dno-Mir-24-P2  Dre-Mir-24-P2a  Dre-Mir-24-P2b  Eca-Mir-24-P2  Ete-Mir-24-P2  Gga-Mir-24-P2  Gmo-Mir-24-P2b  Hsa-Mir-24-P2  Laf-Mir-24-P2  Lch-Mir-24-P2  Loc-Mir-24-P2  Mdo-Mir-24-P2  Mml-Mir-24-P2  Mmr-Mir-24-P2  Mmu-Mir-24-P2  Mun-Mir-24-P2  Neu-Mir-24-P2  Oan-Mir-24-P2  Ocu-Mir-24-P2  Pab-Mir-24-P2  Pbv-Mir-24-P2  Rno-Mir-24-P2  Sha-Mir-24-P2  Spt-Mir-24-P2  Tgu-Mir-24-P2  Tni-Mir-24-P2b  Xla-Mir-24-P2c  Xla-Mir-24-P2d  Xtr-Mir-24-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01002700.1: 238946-239005 [-]
Clustered miRNAs
(< 50kb from Mir-24-P2)		 Mir-24-P2 BFAA01002700.1: 238946-239005 [-]
Mir-27-P2 BFAA01002700.1: 246153-246216 [-]
Mir-23-P2 BFAA01002700.1: 246394-246453 [-]
Seed GGCUCAG
Precursor
(pre-Mir +30nt flank)		 
AACCCAGCCAGGAUGUGGACCUGAUCUCUCGUGCCUACUGAACUGAUAACAGUUACUAUAUUACAUACUGGCUCAGUUCAGCAGGAACAGGAGUUGGGCCCUUAAGCUACGCCGUUCCGA
Get precursor sequence
Structure
        10           20        30        40        50          
AACCCAGCCAGGAUGUGGA---| UG U   UC  G   A         UAA    UACUAU 
                      CC  A CUC  GU CCU CUGAACUGA   CAGU      \
                      GG  U GAG  CA GGA GACUUGACU   GUCA      A
AGCCUUGCCGCAUCGAAUUCCC^ GU -   GA  A   C         CG-    UACAUU 
.       110       100         90        80         70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Sto-Mir-24-P2_5p*
mirBase accessionNone
Sequence 
0- GUGCCUACUGAACUGAUAACAGU -23
Get sequence
Mature sequence

Sto-Mir-24-P2_3p
mirBase accessionNone
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
Get sequence