MirGeneDB 3.0
MirGeneDB ID

Aga-Mir-2-P5b

Family name MIR-2 (all species)
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-2944b
Paralogues Aga-Mir-2-P1-v1  Aga-Mir-2-P2a  Aga-Mir-2-P2b  Aga-Mir-2-P3  Aga-Mir-2-P4-v1  Aga-Mir-2-P5a1  Aga-Mir-2-P5a2  Aga-Mir-2-P7  Aga-Mir-2-P8 
Orthologues Aae-Mir-2-P5b  Cel-Mir-2-o5  Dan-Mir-2-P5  Dlo-Mir-2-P5  Dma-Mir-2-P5  Dme-Mir-2-P5  Dmo-Mir-2-P5  Dpu-Mir-2-P5  Dsi-Mir-2-P5  Dya-Mir-2-P5  Gpa-Mir-2-P5-v1  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) Culicidae
Node of Origin (family) Protostomia
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)		 NC_064602.1: 42670305-42670366 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P5b)		 Mir-3-o2 NC_064602.1: 42669953-42670018 [-] Ensembl
Mir-2-P5a1 NC_064602.1: 42670118-42670173 [-] Ensembl
Mir-2-P5b NC_064602.1: 42670305-42670366 [-] Ensembl
Mir-279-P1a NC_064602.1: 42670645-42670715 [-] Ensembl
Seed AAGGAAC
Precursor
(pre-Mir +30nt flank)		 
AAGUACUCAAAAUCACAGGAAGUGGCGAUCGAAGGAACUCCCGGUGUGAUAUGUUGGAAAAUCCGUACCAUAUCACAGCGGUAGUUACCUGAUAUUGCUGCUGUUCCUCAUUCAACGCGUGC
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Structure
        10        20        30         40        50        60 
AAGUACUCAAAAUCACAGGA  UG     CGA   -|   C   G         UUGGAAA 
                    AG  GCGAU   AGG AACU CCG UGUGAUAUG       \
                    UC  CGUUA   UCC UUGA GGC ACACUAUAC       A
CGUGCGCAACUUACUCCUUG  GU     UAG   A^   U   G         CAUGCCU 
120       110       100        90        80        70
Deep sequencing
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Commentmfold supports a different hairpin structure than MirMachine; for the purposes of annotating here, I have recorded the arms based on the MirMachine hairpin
3' NTU No
MotifsNo
Tissue expression
- +
Ab Ab He He Mi Mi Ov Ov Ov
Mature sequence

Aga-Mir-2-P5b_5p
mirBase accessionMIMAT0041507
Sequence 
0- GAAGGAACUCCCGGUGUGAUAUG -23
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Star sequence

Aga-Mir-2-P5b_3p*
mirBase accessionMIMAT0041508
Sequence 
40- UAUCACAGCGGUAGUUACCUGA -62
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