MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-2-P3o

Family name MIR-2 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-2-P1n  Csc-Mir-2-P1o  Csc-Mir-2-P2n  Csc-Mir-2-P2o  Csc-Mir-2-P3n  Csc-Mir-2-P4n  Csc-Mir-2-P4o 
Orthologues Aae-Mir-2-P3  Aga-Mir-2-P3  Bge-Mir-2-P3-v1  Cbr-Mir-2-o3  Cel-Mir-2-o3  Dlo-Mir-2-P3-v1  Dma-Mir-2-P3  Dpu-Mir-2-P3  Gsp-Mir-2  Hme-Mir-2-P3-v1  Isc-Mir-2-P3  Ple-Mir-2  Tca-Mir-2-P3-v1 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384652.1: 446579-446637 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P3o)		 Mir-2-P4o NW_019384652.1: 439498-439557 [-] Ensembl
Mir-2-P3o NW_019384652.1: 446579-446637 [-] Ensembl
Mir-2-P2o NW_019384652.1: 447782-447839 [-] Ensembl
Mir-2-P1o NW_019384652.1: 447944-448006 [-] Ensembl
Mir-71-P15 NW_019384652.1: 448162-448221 [-] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
AUAACAAAGAAAAUAUUGUAUGCAACAUUACUCACAAAGUGGCUGUUAUAUGUAAAUUUAAAUCAUAUCACAGCCAGCUUUGAUGAGCAAUGAAGUAUAUAUUUUCAACUUCAAGCACU
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Structure
        10          20        30          40        50        
AUAACAAAGAAAAUAUU--      AA    A    -     -|      U     UAAAU 
                   GUAUGC  CAUU CUCA CAAAG UGGCUGU AUAUG     \
                   UAUAUG  GUAA GAGU GUUUC ACCGACA UAUAC     U
UCACGAACUUCAACUUUUA      AA    C    A     G^      C     UAAAU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-2-P3o_5p*
mirBase accessionNone
Sequence 
0- CUCACAAAGUGGCUGUUAUAUG -22
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Mature sequence

Csc-Mir-2-P3o_3p
mirBase accessionNone
Sequence 
35- UAUCACAGCCAGCUUUGAUGAGCA -59
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