MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-2-P4o

Family name MIR-2 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-2-P1n  Csc-Mir-2-P1o  Csc-Mir-2-P2n  Csc-Mir-2-P2o  Csc-Mir-2-P3n  Csc-Mir-2-P3o  Csc-Mir-2-P4n 
Orthologues Aae-Mir-2-P4-v1  Aga-Mir-2-P4-v1  Bge-Mir-2-P4-v1  Cbr-Mir-2-o4  Cel-Mir-2-o4  Dma-Mir-2-P4  Dpu-Mir-2-P4  Gsp-Mir-2  Hme-Mir-2-P4  Isc-Mir-2-P4  Ple-Mir-2  Tca-Mir-2-P4-v1 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384652.1: 439498-439557 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P4o)		 Mir-2-P4o NW_019384652.1: 439498-439557 [-] Ensembl
Mir-2-P3o NW_019384652.1: 446579-446637 [-] Ensembl
Mir-2-P2o NW_019384652.1: 447782-447839 [-] Ensembl
Mir-2-P1o NW_019384652.1: 447944-448006 [-] Ensembl
Mir-71-P15 NW_019384652.1: 448162-448221 [-] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
GAAGAAAACUGGAGAUAGCUGUGUUUCCACUCAUCAAAGUGGCUCUGAUGUGUUUUAUUAAUUUUCAUAUCACAGCCAGCUUUGAUGAGCGAAAACAUUGGCAGUUGUCAACUUUUUAAA
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Structure
        10         20         30         40        50         
GAAGAAAACUGGAGAUA-   -      CCA          -|    C       UUUUAU 
                  GCU GUGUUU   CUCAUCAAAG UGGCU UGAUGUG      \
                  CGG UACAAA   GAGUAGUUUC ACCGA ACUAUAC      U
AAAUUUUUCAACUGUUGA   U      AGC          G^    C       UUUUAA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-2-P4o_5p*
mirBase accessionNone
Sequence 
0- UCAUCAAAGUGGCUCUGAUGUG -22
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Mature sequence

Csc-Mir-2-P4o_3p
mirBase accessionNone
Sequence 
37- UAUCACAGCCAGCUUUGAUGAGC -60
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