MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-2-P4n

Family name MIR-2 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-2-P1n  Csc-Mir-2-P1o  Csc-Mir-2-P2n  Csc-Mir-2-P2o  Csc-Mir-2-P3n  Csc-Mir-2-P3o  Csc-Mir-2-P4o 
Orthologues Aae-Mir-2-P4-v1  Aga-Mir-2-P4-v1  Bge-Mir-2-P4-v1  Cbr-Mir-2-o4  Cel-Mir-2-o4  Dma-Mir-2-P4  Dpu-Mir-2-P4  Gsp-Mir-2  Hme-Mir-2-P4  Isc-Mir-2-P4  Ple-Mir-2  Tca-Mir-2-P4-v1 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384303.1: 1025167-1025228 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P4n)		 Mir-71-P14 NW_019384303.1: 1024444-1024501 [+] Ensembl
Mir-2-P1n NW_019384303.1: 1024581-1024642 [+] Ensembl
Mir-2-P2n NW_019384303.1: 1024715-1024775 [+] Ensembl
Mir-2-P3n NW_019384303.1: 1024845-1024903 [+] Ensembl
Mir-2-P4n NW_019384303.1: 1025167-1025228 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
AUACGCAAAUGUUUUUAACUCAUGUUUCUAGUCGUCAGAGUGGUUUUGAUAUGUAAAACUCCUCUCCAUAUCACAGCCAGCUUUGAUGAGUAGAACCAUGGGUAAUGUAGCUUCUGCCUUGA
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Structure
        10          20        30        40         50          
AUACGCAAAUGUUUUUA--       U     G         -|    U       UAAAAC 
                   ACUCAUG UUCUA UCGUCAGAG UGGUU UGAUAUG      \
                   UGGGUAC AAGAU AGUAGUUUC ACCGA ACUAUAC      U
AGUUCCGUCUUCGAUGUAA       C     G         G^    C       CUCUCC 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-2-P4n_5p*
mirBase accessionNone
Sequence 
0- GUCGUCAGAGUGGUUUUGAUAUG -23
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Mature sequence

Csc-Mir-2-P4n_3p
mirBase accessionNone
Sequence 
38- UAUCACAGCCAGCUUUGAUGAGUA -62
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