MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-23-P1

Family name MIR-23 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-23-P2a  Mal-Mir-23-P2b  Mal-Mir-23-P3  Mal-Mir-23-P4a 
Orthologues Dre-Mir-23-P1  Gmo-Mir-23-P1  Lch-Mir-23-P1  Loc-Mir-23-P1  Pma-Mir-23-o1  Sto-Mir-23-P1  Tni-Mir-23-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884702.1: 3700621-3700681 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-23-P1)		 Mir-23-P1 KV884702.1: 3700621-3700681 [+] UCSC Ensembl
Mir-27-P1 KV884702.1: 3701989-3702051 [+] UCSC Ensembl
Seed UCACAUU
Precursor
(pre-Mir +30nt flank)		 
CAGGAUGCUGAAUGGUUGGUUUGGCUGGAGGGAUUCCUGGCAGAGUGAUUUGGUCAUGAUGUAAUGUAAAUCACAUUGCCAGGGAUUUCCAACCAGCUUCAGCUGAAACCCACGCCAGCCU
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Structure
        10        20           30        40        50         
CAGGAUGCUGAAUGGUUG   U-      A--|GG           A       GGUCAUG 
                  GUU  GGCUGG   G  AUUCCUGGCAG GUGAUUU       A
                  CGA  UCGACC   C  UAGGGACCGUU CACUAAA       U
UCCGACCGCACCCAAAGU   CU      AAC^UU           A       UGUAAUG 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-23-P1_5p*
mirBase accessionNone
Sequence 
0- GGAUUCCUGGCAGAGUGAUUU -21
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Mature sequence

Mal-Mir-23-P1_3p
mirBase accessionNone
Sequence 
39- AUCACAUUGCCAGGGAUUUCCA -61
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