MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-23-P4a

Family name MIR-23 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-23-P1  Mal-Mir-23-P2a  Mal-Mir-23-P2b  Mal-Mir-23-P3 
Orthologues Cmi-Mir-23-P4  Dre-Mir-23-P4a  Gmo-Mir-23-P4a  Lch-Mir-23-P4  Loc-Mir-23-P4  Sto-Mir-23-P4  Tni-Mir-23-P4a  Xtr-Mir-23-P4 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884817.1: 553132-553195 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-23-P4a)		 Mir-24-P4a KV884817.1: 549216-549275 [-] UCSC Ensembl
Mir-27-P4a KV884817.1: 552481-552544 [-] UCSC Ensembl
Mir-23-P4a KV884817.1: 553132-553195 [-] UCSC Ensembl
Seed UCACAUU
Precursor
(pre-Mir +30nt flank)		 
AUCCAGCCUCUGCCCUGGCUGUGGUGGGGAGGGUUCCUGGCACCGUGAUUUGAUGAAUAAAGAGAUAUAAAAAUCACAUUGCCAGGGAUUUCCACUCCUUCACAGCUCAGCAGGUGACCUGGCC
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Structure
        10         20        30          40        50        60 
AUCCAGCCUCUGCCCUG-       U    A  --|         CC       GAUGAAUAA 
                  GCUGUGG GGGG GG  GUUCCUGGCA  GUGAUUU         \
                  CGACACU CCUC CC  UAGGGACCGU  CACUAAA         A
CCGGUCCAGUGGACGACU       U    A  UU^         UA       AAUAUAGAG 
  120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-23-P4a_5p*
mirBase accessionNone
Sequence 
0- GGGUUCCUGGCACCGUGAUUU -21
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Mature sequence

Mal-Mir-23-P4a_3p
mirBase accessionNone
Sequence 
42- AUCACAUUGCCAGGGAUUUCCA -64
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