MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-23-P3

Family name MIR-23 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-23-P1  Mal-Mir-23-P2a  Mal-Mir-23-P2b  Mal-Mir-23-P4a 
Orthologues Aca-Mir-23-P3  Ami-Mir-23-P3  Bta-Mir-23-P3  Cfa-Mir-23-P3  Cja-Mir-23-P3  Cmi-Mir-23-P3a  Cmi-Mir-23-P3b  Cpi-Mir-23-P3  Cpo-Mir-23-P3  Dno-Mir-23-P3  Dre-Mir-23-P3  Eca-Mir-23-P3  Ete-Mir-23-P3  Gja-Mir-23-P3  Gmo-Mir-23-P3  Hsa-Mir-23-P3  Laf-Mir-23-P3  Lch-Mir-23-P3  Mdo-Mir-23-P3  Mml-Mir-23-P3  Mmr-Mir-23-P3  Mmu-Mir-23-P3  Mun-Mir-23-P3e  Mun-Mir-23-P3f  Neu-Mir-23-P3  Oan-Mir-23-P3  Ocu-Mir-23-P3  Pab-Mir-23-P3  Pbv-Mir-23-P3  Rno-Mir-23-P3  Sha-Mir-23-P3  Sto-Mir-23-P3  Tgu-Mir-23-P3  Tni-Mir-23-P3  Xla-Mir-23-P3c  Xla-Mir-23-P3d  Xtr-Mir-23-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884862.1: 448756-448817 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-23-P3)		 Mir-23-P3 KV884862.1: 448756-448817 [+] UCSC Ensembl
Mir-27-P3 KV884862.1: 448987-449048 [+] UCSC Ensembl
Seed UCACAUU
Precursor
(pre-Mir +30nt flank)		 
UAAUCUGUCUACUUGUCUCUGUUGACCAGGGGAAUUCCUGGCAGAGUGAUUUUUGAGACUACACGACUGAAUCACAUUGCCAGGGAUUUCCAAUGGCUGACAUGAAGGAAGCAACAUUUUCU
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Structure
        10         20         30        40        50        60
UAAUCUGUCUACUUGUCUC-    GA   G-|              A       UUGAGAC 
                    UGUU  CCA  GGGAAUUCCUGGCAG GUGAUUU       U
                    ACAG  GGU  CCUUUAGGGACCGUU CACUAAG       A
UCUUUUACAACGAAGGAAGU    UC   AA^              A       UCAGCAC 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-23-P3_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGAAUUCCUGGCAGAGUGAUUU -22
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Mature sequence

Mal-Mir-23-P3_3p
mirBase accessionNone
Sequence 
40- AUCACAUUGCCAGGGAUUUCCA -62
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