MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-23-P3

Family name MIR-23 (all species)
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-23-P2 
Orthologues Aca-Mir-23-P3  Ami-Mir-23-P3  Bta-Mir-23-P3  Cfa-Mir-23-P3  Cja-Mir-23-P3  Cmi-Mir-23-P3a  Cmi-Mir-23-P3b  Cpi-Mir-23-P3  Cpo-Mir-23-P3  Dno-Mir-23-P3  Dre-Mir-23-P3  Eca-Mir-23-P3  Ete-Mir-23-P3  Gmo-Mir-23-P3  Hsa-Mir-23-P3  Laf-Mir-23-P3  Lch-Mir-23-P3  Mal-Mir-23-P3  Mdo-Mir-23-P3  Mml-Mir-23-P3  Mmr-Mir-23-P3  Mmu-Mir-23-P3  Mun-Mir-23-P3e  Mun-Mir-23-P3f  Neu-Mir-23-P3  Oan-Mir-23-P3  Ocu-Mir-23-P3  Pab-Mir-23-P3  Pbv-Mir-23-P3  Rno-Mir-23-P3  Sha-Mir-23-P3  Sto-Mir-23-P3  Tgu-Mir-23-P3  Tni-Mir-23-P3  Xla-Mir-23-P3c  Xla-Mir-23-P3d  Xtr-Mir-23-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015175453.1: 136216-136276 [-]
Clustered miRNAs
(< 50kb from Mir-23-P3)		 Mir-24-P3 NW_015175453.1: 135655-135714 [-]
Mir-27-P3 NW_015175453.1: 135915-135976 [-]
Mir-23-P3 NW_015175453.1: 136216-136276 [-]
Seed UCACAUU
Precursor
(pre-Mir +30nt flank)		 
AUGUCUCUCCCUUCCCCGCCACUGCCUGCCGGGGUUCCUGGUGAUGGGAUUUUAUCCUCAUGCGCAGAAUCACAUUGCCAGGGAUUUCCAACGGUCGGUGAGCCGCCACGUGCGGAUGGAG
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Structure
        10          20        30         40        50         
AUGUCUCUCCCUUCCCC-  -     C   CC-|GG        UG   G     UAUCCU 
                  GC CACUG CUG   G  GUUCCUGG  AUG GAUUU      C
                  CG GUGGC GGC   C  UAGGGACC  UAC CUAAG      A
GAGGUAGGCGUGCACCGC  A     U   AAC^UU        GU   A     ACGCGU 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Gja-Mir-23-P3_5p*
mirBase accessionNone
Sequence 
0- GGGGUUCCUGGUGAUGGGAUUU -22
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Mature sequence

Gja-Mir-23-P3_3p
mirBase accessionNone
Sequence 
38- AUCACAUUGCCAGGGAUUUCCAA -61
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