| MirGeneDB ID | Oan-Mir-23-P3 |
| Family name |
MIR-23 (all species) |
| Species |
Platypus (Ornithorhynchus anatinus) |
| MiRBase ID |
oan-mir-23a
|
| Paralogues |
Oan-Mir-23-P2
|
| Orthologues |
Aca-Mir-23-P3
Ami-Mir-23-P3
Bta-Mir-23-P3
Cfa-Mir-23-P3
Cja-Mir-23-P3
Cmi-Mir-23-P3a
Cmi-Mir-23-P3b
Cpi-Mir-23-P3
Cpo-Mir-23-P3
Dno-Mir-23-P3
Dre-Mir-23-P3
Eca-Mir-23-P3
Ete-Mir-23-P3
Gja-Mir-23-P3
Gmo-Mir-23-P3
Hsa-Mir-23-P3
Laf-Mir-23-P3
Lch-Mir-23-P3
Mal-Mir-23-P3
Mdo-Mir-23-P3
Mml-Mir-23-P3
Mmr-Mir-23-P3
Mmu-Mir-23-P3
Mun-Mir-23-P3e
Mun-Mir-23-P3f
Neu-Mir-23-P3
Ocu-Mir-23-P3
Pab-Mir-23-P3
Pbv-Mir-23-P3
Rno-Mir-23-P3
Sha-Mir-23-P3
Sto-Mir-23-P3
Tgu-Mir-23-P3
Tni-Mir-23-P3
Xla-Mir-23-P3c
Xla-Mir-23-P3d
Xtr-Mir-23-P3
|
| Node of Origin (locus) |
Gnathostomata
|
| Node of Origin (family) |
Vertebrata
|
Genome context (mOrnAna1.p.v1_plustraces) |
Oan-Mir-23-P1_KAAE-bpy46e04: 255-315 [-]
|
| Seed |
UCACAUU |
Precursor (pre-Mir +30nt flank) |
UCUACCCGAGCCCCUCUGCCGCCGGCGGCUGGGGUUCCUGGUGAUGCGAUUUUCUUGUGCUCGCCAAAAUCACAUUGCCAGGGAUUUCCAACUGGCGGCGUGCCCAGCUGGCAGGAGUGCC
Get precursor sequence
|
| Structure | 10 20 30 40 50
UCUACCCGAGCCCCUCU- - G C -| UG C UCUUGU
GC CGCCG CGG UGG GGUUCCUGG AUG GAUUU G
CG GCGGC GUC ACC UUAGGGACC UAC CUAAA C
CCGUGAGGACGGUCGACC U G A U^ GU A ACCGCU
. 110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| Comment | Not in assenbmly but in trace archives. |
| 3' NTU |
No
|
| Motifs | UG at 5p(-14) |
Tissue expression
|
|
| Star sequence |
Oan-Mir-23-P3_5p* |
| mirBase accession | MIMAT0007060 |
| Sequence |
0- GGGGUUCCUGGUGAUGCGAUUU -22
Get sequence
|
| Mature sequence |
Oan-Mir-23-P3_3p |
| mirBase accession | MIMAT0007061 |
| Sequence |
38- AUCACAUUGCCAGGGAUUUCCAA -61
Get sequence
|