MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-23-P1

Family name MIR-23 (all species)
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID tni-mir-23a-2
Paralogues Tni-Mir-23-P2b  Tni-Mir-23-P3  Tni-Mir-23-P4a 
Orthologues Dre-Mir-23-P1  Gmo-Mir-23-P1  Lch-Mir-23-P1  Loc-Mir-23-P1  Mal-Mir-23-P1  Pma-Mir-23-o1  Sto-Mir-23-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 15_random: 3094562-3094622 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-23-P1)		 Mir-24-P1 15_random: 3093022-3093080 [-] UCSC Ensembl
Mir-27-P1 15_random: 3094204-3094266 [-] UCSC Ensembl
Mir-23-P1 15_random: 3094562-3094622 [-] UCSC Ensembl
Seed UCACAUU
Precursor
(pre-Mir +30nt flank)		 
AGGACGCCGGGAUGGUGGAUUUAGCUGGAGGGAUUCCUGGCAGAGUGAUUUGGCUGUGAUGUAAUGUAAAUCACAUUGCCAGGGAUUUCCAACCAGCUAGAGCUGAAUGCGUCAGGUCCCC
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Structure
        10         20          30        40        50         
AGGACGCCGGGAUGGUGGA-         A--|GG           A       GGCUGUG 
                    UUUAGCUGG   G  AUUCCUGGCAG GUGAUUU       A
                    AGAUCGACC   C  UAGGGACCGUU CACUAAA       U
CCCCUGGACUGCGUAAGUCG         AAC^UU           A       UGUAAUG 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Sp Sp Sp To
Star sequence

Tni-Mir-23-P1_5p*
mirBase accessionNone
Sequence 
0- GGAUUCCUGGCAGAGUGAUUU -21
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Mature sequence

Tni-Mir-23-P1_3p
mirBase accessionMIMAT0002913
Sequence 
39- AUCACAUUGCCAGGGAUUUCCA -61
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