MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-15-P1d

Family name MIR-15 (all species)
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID
Paralogues Oan-Mir-15-P1a  Oan-Mir-15-P1b  Oan-Mir-15-P1c  Oan-Mir-15-P2a  Oan-Mir-15-P2b  Oan-Mir-15-P2c  Oan-Mir-15-P2d 
Orthologues Ami-Mir-15-P1d  Bta-Mir-15-P1d  Cfa-Mir-15-P1d  Cin-Mir-15-P1  Cja-Mir-15-P1d  Cpo-Mir-15-P1d  Dno-Mir-15-P1d  Dre-Mir-15-P1d  Eca-Mir-15-P1d  Ete-Mir-15-P1d  Hsa-Mir-15-P1d  Laf-Mir-15-P1d  Loc-Mir-15-P1d  Mdo-Mir-15-P1d  Mml-Mir-15-P1d  Mmr-Mir-15-P1d  Mmu-Mir-15-P1d  Neu-Mir-15-P1d  Ocu-Mir-15-P1d  Pab-Mir-15-P1d  Rno-Mir-15-P1d  Sha-Mir-15-P1d  Sto-Mir-15-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041753.1: 7279407-7279468 [+]
Clustered miRNAs
(< 50kb from Mir-15-P1d)		 Mir-15-P1d NC_041753.1: 7279407-7279468 [+]
Mir-15-P2d NC_041753.1: 7279566-7279631 [+]
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
CCCGCCGACCCCCCGGUCCCGCCCCCGCCCCAGCAGCACACCGUGGUUUGUACGGCGAUGCGGCCGCGUCCAAACCACGCUGUGUUGUUAGAGCGAGGGCGGGGGAGGCAGCGCGUGGGGGU
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Structure
        10          20        30        40        50        60
CCCGCCGACCCCCCGGU--|      C   CCC         C         UACGGCGAU 
                   CCCGCCC CGC   AGCAGCACA CGUGGUUUG         G
                   GGGCGGG GCG   UUGUUGUGU GCACCAAAC         C
UGGGGGUGCGCGACGGAGG^      A   AGA         C         CUGCGCCGG 
120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut +1 on the 3p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Oan-Mir-15-P1d_5p
mirBase accessionNone
Sequence 
0- CAGCAGCACACCGUGGUUUGUA -22
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Co-mature sequence

Oan-Mir-15-P1d_3p
mirBase accessionNone
Sequence 
40- CAAACCACGCUGUGUUGUUAGA -62
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