MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-15-P1d

Family name MIR-15 (all species)
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-497a
Paralogues Mmu-Mir-15-P1a  Mmu-Mir-15-P1b  Mmu-Mir-15-P1c-v1  Mmu-Mir-15-P2a  Mmu-Mir-15-P2b  Mmu-Mir-15-P2c  Mmu-Mir-15-P2d 
Orthologues Ami-Mir-15-P1d  Bta-Mir-15-P1d  Cfa-Mir-15-P1d  Cin-Mir-15-P1  Cja-Mir-15-P1d  Cpo-Mir-15-P1d  Dno-Mir-15-P1d  Dre-Mir-15-P1d  Eca-Mir-15-P1d  Ete-Mir-15-P1d  Hsa-Mir-15-P1d  Laf-Mir-15-P1d  Loc-Mir-15-P1d  Mdo-Mir-15-P1d  Mml-Mir-15-P1d  Mmr-Mir-15-P1d  Neu-Mir-15-P1d  Oan-Mir-15-P1d  Ocu-Mir-15-P1d  Pab-Mir-15-P1d  Rno-Mir-15-P1d  Sha-Mir-15-P1d  Sto-Mir-15-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(mm10)		 chr11: 70234730-70234791 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1d)		 Mir-15-P1d chr11: 70234730-70234791 [+] UCSC Ensembl
Mir-15-P2d chr11: 70235062-70235122 [+] UCSC Ensembl
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
UCUCGACCCACCCCAGUCCUGCCCCCGCCCCAGCAGCACACUGUGGUUUGUACGGCACUGUGGCCACGUCCAAACCACACUGUGGUGUUAGAGCGAGGGUAUGGGAGGCACCGAUGAGCCUG
Get precursor sequence
Structure
        10          20        30        40        50        60
UCUCGACCCACCCCAGU-  -|    C   CCC    G    C         UACGGCACU 
                  CC UGCCC CGC   AGCA CACA UGUGGUUUG         G
                  GG AUGGG GCG   UUGU GUGU ACACCAAAC         U
GUCCGAGUAGCCACGGAG  U^    A   AGA    G    C         CUGCACCGG 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-15-P1d_5p
mirBase accessionMIMAT0003453
Sequence 
0- CAGCAGCACACUGUGGUUUGUA -22
Get sequence
Proposed targets microrna.org: MIMAT0003453
TargetScanVert: mmu-miR-497a-5p
miRDB: MIMAT0003453
Star sequence

Mmu-Mir-15-P1d_3p*
mirBase accessionMIMAT0017247
Sequence 
40- CAAACCACACUGUGGUGUUAGA -62
Get sequence
Proposed targets TargetScanVert: mmu-miR-497a-3p
miRDB: MIMAT0017247