MirGeneDB 3.0
MirGeneDB ID

Ovu-Mir-1994-P2

Family name MIR-1994 (all species)
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues Ovu-Mir-1994-P1 
Orthologues Agr-Mir-1994-P2  Cte-Mir-1994  Dgr-Mir-1994  Eba-Mir-1994-P2  Efe-Mir-1994  Esc-Mir-1994-P2  Hru-Mir-1994-P2  Lan-Mir-1994-o2a  Lan-Mir-1994-o2b  Lgi-Mir-1994-P2  Llo-Mir-1994  Mgi-Mir-1994-P2  Mom-Mir-1994-P2  Npo-Mir-1994-P2  Obi-Mir-1994-P2  Pve-Mir-1994-P2a  Pve-Mir-1994-P2b  Rph-Mir-1994-P2  War-Mir-1994-P2 
Node of Origin (locus) Mollusca
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_003957725.1_ASM395772v1_OVU)		 RXHP01025550.1: 111143-111201 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-1994-P2)		 Mir-1994-P1 RXHP01025550.1: 105972-106034 [+] Ensembl
Mir-1994-P2 RXHP01025550.1: 111143-111201 [+] Ensembl
Seed GAGACAG
Precursor
(pre-Mir +30nt flank)		 
UGUUUUGAAAUAGAAAAUGGCUAACUUCUUAGGAAGAACAAACUGAUCCCACAUUAAUGAUGCUCUGUGAGACAGUGUGUCCUCCCUCAGGGGUACAUCUACAACAGCCACUCCGUCCA
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Structure
        10        20          30        40        50         
UGUUUUGAAAUAGAAAAUGGCUA--|     U   A  A   A    A  C    UUAAU 
                         ACUUCU AGG AG ACA ACUG UC CACA     G
                         UGGGGA UCC UC UGU UGAC AG GUGU     A
ACCUGCCUCACCGACAACAUCUACA^     C   C  C   G    -  A    CUCGU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Star sequence

Ovu-Mir-1994-P2_5p*
mirBase accessionNone
Sequence 
0- AGGAAGAACAAACUGAUCCCACA -23
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Mature sequence

Ovu-Mir-1994-P2_3p
mirBase accessionNone
Sequence 
37- UGAGACAGUGUGUCCUCCCUCA -59
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