MirGeneDB 3.0
MirGeneDB ID

Hru-Mir-1994-P2

Family name MIR-1994 (all species)
Species Red Abalone (Haliotis rufescens)
MiRBase ID
Paralogues Hru-Mir-1994-P1 
Orthologues Agr-Mir-1994-P2  Cte-Mir-1994  Dgr-Mir-1994  Eba-Mir-1994-P2  Efe-Mir-1994  Esc-Mir-1994-P2  Lan-Mir-1994-o2a  Lan-Mir-1994-o2b  Lgi-Mir-1994-P2  Llo-Mir-1994  Mgi-Mir-1994-P2  Mom-Mir-1994-P2  Npo-Mir-1994-P2  Obi-Mir-1994-P2  Ovu-Mir-1994-P2  Pve-Mir-1994-P2a  Pve-Mir-1994-P2b  Rph-Mir-1994-P2  War-Mir-1994-P2 
Node of Origin (locus) Mollusca
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_023055435.1_xgHalRufe1.0.p_genomic_plus_traces)		 JALGQA010000042.1: 3514060-3514117 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1994-P2)		 Mir-1994-P1 JALGQA010000042.1: 3513498-3513556 [+] UCSC Ensembl
Mir-1994-P2 JALGQA010000042.1: 3514060-3514117 [+] UCSC Ensembl
Seed GAGACAG
Precursor
(pre-Mir +30nt flank)		 
GUGCACUGAUUAUUUAAGGUGGCUGUUCUCAGGGAGAUCAUCCUGUCUGCAUGCUAUGCAUAUUCAUGAGACAGUGUGUCCUCCCUCAGGCUUAGCUUGUCGCCAAUAGCAACCCGAG
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Structure
        10        20          30        40        50         
GUGCACUGAUUAUUUAAGGU-     U-|  C      AU  UC      G    CUAUG 
                     GGCUG  UCU AGGGAG  CA  CUGUCU CAUG     \
                     UCGAU  GGA UCCCUC  GU  GACAGA GUAC     C
GAGCCCAACGAUAACCGCUGU     UC^  C      CU  GU      -    UUAUA 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To To
Star sequence

Hru-Mir-1994-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGGAGAUCAUCCUGUCUGCAUG -23
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Mature sequence

Hru-Mir-1994-P2_3p
mirBase accessionNone
Sequence 
36- UGAGACAGUGUGUCCUCCCUCA -58
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