| MirGeneDB ID | Npo-Mir-1994-P2 |
|---|---|
| Family name | MIR-1994 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | Npo-Mir-1994-P1 |
| Orthologues | Agr-Mir-1994-P2 Cte-Mir-1994 Dgr-Mir-1994 Eba-Mir-1994-P2 Efe-Mir-1994 Esc-Mir-1994-P2 Hru-Mir-1994-P2 Lan-Mir-1994-o2a Lan-Mir-1994-o2b Lgi-Mir-1994-P2 Llo-Mir-1994 Mgi-Mir-1994-P2 Mom-Mir-1994-P2 Obi-Mir-1994-P2 Ovu-Mir-1994-P2 Pve-Mir-1994-P2a Pve-Mir-1994-P2b Rph-Mir-1994-P2 War-Mir-1994-P2 |
| Node of Origin (locus) | Mollusca |
| Node of Origin (family) | Lophotrochozoa |
| Genome context (GCA_018389105_NPO) |
JACATO010001148.1: 5202-5261 [+] Ensembl |
| Clustered miRNAs (< 50kb from Mir-1994-P2) |
Mir-1994-P1
JACATO010001148.1: 4537-4597 [+]
Ensembl
Mir-1994-P2 JACATO010001148.1: 5202-5261 [+] Ensembl |
| Seed | GAGACAG |
| Precursor (pre-Mir +30nt flank) |
AAAAGCAGUGACUUAAUGGCUGCUGUUCUUAGGAAGAACUUGUUGUCUUCACAUGAUCUUGAAAUUUGUGAGACAGUGUGUCCUCCCUCAGAUCCCGUGUUGUAGCCAAACCAUCCAUUAGet precursor sequence |
| Structure | 10 20 30 40 50 AAAAGCAGUGACUUAAU--| UGCUGU U A A U GU U UGAUCU GGC UCU AGG AG AC U UGUCU CACA \ UUG AGA UCC UC UG G ACAGA GUGU U AUUACCUACCAAACCGAUG^ UGCCCU C C C U UG - UUAAAG . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Star sequence | Npo-Mir-1994-P2_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AGGAAGAACUUGUUGUCUUCACA -23
Get sequence
|
| Mature sequence | Npo-Mir-1994-P2_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- UGAGACAGUGUGUCCUCCCUCA -60
Get sequence
|
