MirGeneDB 3.0
MirGeneDB ID

Dya-Mir-962

Family name MIR-962 (all species)
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues
Orthologues Dan-Mir-962  Dme-Mir-962  Dmo-Mir-962  Dsi-Mir-962 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)		 2L: 13551941-13552000 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-962)		 Mir-964-v1 2L: 13551083-13551143 [-] UCSC Ensembl
Mir-964-v2 2L: 13551084-13551142 [-] UCSC Ensembl
Mir-963 2L: 13551212-13551277 [-] UCSC Ensembl
Mir-962 2L: 13551941-13552000 [-] UCSC Ensembl
Mir-961 2L: 13552048-13552106 [-] UCSC Ensembl
Mir-960 2L: 13552167-13552226 [-] UCSC Ensembl
Mir-959-v1 2L: 13552286-13552348 [-] UCSC Ensembl
Mir-959-v2 2L: 13552287-13552347 [-] UCSC Ensembl
Seed UAAGGUA
Precursor
(pre-Mir +30nt flank)		 
AUCCAACCAACUUCAUGGGGCACACAAGCUAUAAGGUAGAGAAAUUGUUGUCUUCCACACUAUUCAGACAUCAGUUUAACUAUCUUUCAAUUUGUUUGCCCCCACGCAACAGUGAUAAUG
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Structure
        10          20        30        40        50         
AUCCAACCAACUUCAUG--|    C     CUAU       AG      U    UUCCAC 
                   GGGCA ACAAG    AAGGUAG  AAAUUG UGUC      A
                   CCCGU UGUUU    UUCUAUC  UUUGAC ACAG      C
GUAAUAGUGACAACGCACC^    U     AACU       AA      U    ACUUAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
He Wh
Mature sequence

Dya-Mir-962_5p
mirBase accessionNone
Sequence 
0- AUAAGGUAGAGAAAUUGUUGUC -22
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Star sequence

Dya-Mir-962_3p* (predicted)
mirBase accessionNone
Sequence 
38- CAUCAGUUUAACUAUCUUUCAA -60
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