MirGeneDB 3.0
MirGeneDB ID

Bge-Mir-275

Family name MIR-275 (all species)
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues Aae-Mir-275  Aga-Mir-275  Csc-Mir-275  Dan-Mir-275  Dlo-Mir-275  Dma-Mir-275  Dme-Mir-275  Dmo-Mir-275  Dpu-Mir-275  Dsi-Mir-275  Dya-Mir-275  Gpa-Mir-275  Hme-Mir-275  Isc-Mir-275  Lpo-Mir-275-P3  Lpo-Mir-275-P4-v1  Lpo-Mir-275-P5  Lpo-Mir-275-P6  Lpo-Mir-275-P7  Tca-Mir-275 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(Bger_2.0)		 KZ616644.1: 183402-183466 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-275)		 Mir-275 KZ616644.1: 183402-183466 [+] Ensembl
Mir-305 KZ616644.1: 183539-183599 [+] Ensembl
Seed CAGGUAC
Precursor
(pre-Mir +30nt flank)		 
UCCACAAGGAUUUUUGUCCUGGUCACUCGCACGUGCUGCAUCAGGUGCUAGUGACUGUGAAUAAAUUGUCAGUCAGGUACCUGAAGUAGCGCGCGGAGAGACUCAGGCCUUGCAUCAUAUCUGGU
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Structure
        10         20         30        40        50        60   
UCCACAAGGAUUUUUGU-    -|  A   GCA        A         AG     GUGAAU 
                  CCUG GUC CUC   CGUGCUGC UCAGGUGCU  UGACU      A
                  GGAC CAG GAG   GCGCGAUG AGUCCAUGG  ACUGA      A
UGGUCUAUACUACGUUCC    U^  A   GC-        A         --     CUGUUA 
   120       110       100         90        80          70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Star sequence

Bge-Mir-275_5p*
mirBase accessionNone
Sequence 
0- ACGUGCUGCAUCAGGUGCUAGUGACU -26
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Mature sequence

Bge-Mir-275_3p
mirBase accessionNone
Sequence 
42- UCAGGUACCUGAAGUAGCGCGCG -65
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