MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-275

Family name MIR-275 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues
Orthologues Aae-Mir-275  Aga-Mir-275  Bge-Mir-275  Dan-Mir-275  Dlo-Mir-275  Dma-Mir-275  Dme-Mir-275  Dmo-Mir-275  Dpu-Mir-275  Dsi-Mir-275  Dya-Mir-275  Gpa-Mir-275  Hme-Mir-275  Isc-Mir-275  Lpo-Mir-275-P3  Lpo-Mir-275-P4-v1  Lpo-Mir-275-P5  Lpo-Mir-275-P6  Lpo-Mir-275-P7  Tca-Mir-275 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(GCF_000671375.1_CSC)		 NW_019384322.1: 384393-384455 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-275)		 Mir-275 NW_019384322.1: 384393-384455 [+] Ensembl
Mir-305 NW_019384322.1: 387014-387072 [+] Ensembl
Seed CAGGUAC
Precursor
(pre-Mir +30nt flank)		 
ACCCACCAUUGGGGAAUGCCCGAAGUUCUCACGUGCUGCAUCAGGUGCUUGUGACUGGGCUGUCGAAGUCAGGUACCUGAAGUAGUGCGCGGAGAAAUUCGGGUCUGUGACCACCUUUCCUUC
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Structure
        10          20        30         40        50        60 
ACCCACCAUUGGGGAAU--       G     A-| UG    A         UG     GGGC 
                   GCCCGAA UUCUC  CG  CUGC UCAGGUGCU  UGACU    U
                   UGGGCUU AAGAG  GC  GAUG AGUCCAUGG  ACUGA    G
CUUCCUUUCCACCAGUGUC       A     GC^ GU    A         --     AGCU 
 120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-275_5p*
mirBase accessionNone
Sequence 
0- ACGUGCUGCAUCAGGUGCUUGUGACU -26
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Mature sequence

Csc-Mir-275_3p
mirBase accessionNone
Sequence 
38- UCAGGUACCUGAAGUAGUGCGCGGA -63
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