MirGeneDB 3.0
MirGeneDB ID

Dya-Mir-275

Family name MIR-275 (all species)
Species Fruit fly (Drosophila yakuba)
MiRBase ID dya-mir-275
Paralogues
Orthologues Aae-Mir-275  Aga-Mir-275  Bge-Mir-275  Csc-Mir-275  Dan-Mir-275  Dlo-Mir-275  Dma-Mir-275  Dme-Mir-275  Dmo-Mir-275  Dpu-Mir-275  Dsi-Mir-275  Gpa-Mir-275  Hme-Mir-275  Isc-Mir-275  Lpo-Mir-275-P3  Lpo-Mir-275-P4-v1  Lpo-Mir-275-P5  Lpo-Mir-275-P6  Lpo-Mir-275-P7  Tca-Mir-275 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)		 2L: 5473800-5473861 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-275)		 Mir-305 2L: 5473634-5473694 [-] UCSC Ensembl
Mir-275 2L: 5473800-5473861 [-] UCSC Ensembl
Seed CAGGUAC
Precursor
(pre-Mir +30nt flank)		 
UCCCCCGACUGAACAGAGUCUCCUACCUUGCGCGCUAAUCAGUGACCGGGGCUGGUUUUUUAUAUACAGUCAGGUACCUGAAGUAGCGCGCGUGGUGCCAGACAUAUAUCUCCAACUCCACG
Get precursor sequence
Structure
        10          20        30         40        50        60
UCCCCCGACUGAACAGA--    CC    U         A-|   UG   GG    GGUUUU 
                   GUCU  UACC UGCGCGCUA  UCAG  ACC  GGCU      U
                   CAGA  GUGG GCGCGCGAU  AGUC  UGG  CUGA      U
GCACCUCAACCUCUAUAUA    CC    U         GA^   CA   A-    CAUAUA 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
He Wh
Star sequence

Dya-Mir-275_5p*
mirBase accessionNone
Sequence 
0- CGCGCUAAUCAGUGACCGGGGCU -23
Get sequence
Mature sequence

Dya-Mir-275_3p
mirBase accessionMIMAT0009115
Sequence 
39- UCAGGUACCUGAAGUAGCGCGCG -62
Get sequence